Gene Snas_6005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6005 
Symbol 
ID8887226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6356181 
End bp6357086 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514724 
Protein GI291303446 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000294758 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0811231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAAAG ACGATTTGGA CCACGCGATC CGCAACGGCC TCGACGCCAA GCACACCCCG 
TCCGAGGACG AGATCGTGGC CTCCGCCAAG GCCCTCGAAG CCGCGGTGCG CGAGAAGGCC
GCCATGCACG AACCGCCGTG GCCCGAGAAC TGCTTCACCT GGATCGTTCC CTACTTCAAG
CACTTCTGCT ACCCAGACCC CTTGGGCCCC AAAACGATGG CCGACGACCT CGGCATGATC
CGCACCTCGC TGAAGTCCGG CCAGGTCACC GCGGTCCAGG GCCTGACCCC CATGATCGAG
GACTGGGAGG GCAAGGCGCG CGACTCCTTC TACGACAACT TCCTGGTCCC GTTCCCCGAC
GCGGTCAACA ACCAGATCGA GGTCGTCGAC GAACTGCGAC TGTCCATGTG GGCCTACGAG
AACATCCTGC GCTCGGGCCG CATCGACGCC AAGAAACTCC TGGACGAGAC CAAAAAGGTC
GTCGACTCCT ACGACGGCGA CAAAGCGGCC AAGACCCAGT TCTTCCTGGT CATCGTGGGC
TCGATCGCGG GAGTCATGAA GGACTGGGGC GCGGGCGCCT ACCGACTGGG CCTCTCCCTG
GTCAACGGCT CCGCCACCGG AGCCAAGGGC GCCCACGAGT ACAGCCAGTC CATCTCGGGC
AAGACCGTCT CCGAGATCTT CCAAAGCTTC ATCAACGCCG CCCAAGAGCT GCGCCCACTC
ATGGACGAAC AAGAACAGAC CCTCGCCGAC GCCCTCTCCA GCAGCAACGG CACGGTAGAC
GGCTACCTCA ACAGCTCCAA CCCCAAAACG CTGATGACCC TGCTCCCCAA CGAACCCGAA
ACCGGCCCGG CCATCATCGA CGGCAAACCC AACGACACCA AAGAATTCCG CCCGCCCTAC
CTCTAG
 
Protein sequence
MSKDDLDHAI RNGLDAKHTP SEDEIVASAK ALEAAVREKA AMHEPPWPEN CFTWIVPYFK 
HFCYPDPLGP KTMADDLGMI RTSLKSGQVT AVQGLTPMIE DWEGKARDSF YDNFLVPFPD
AVNNQIEVVD ELRLSMWAYE NILRSGRIDA KKLLDETKKV VDSYDGDKAA KTQFFLVIVG
SIAGVMKDWG AGAYRLGLSL VNGSATGAKG AHEYSQSISG KTVSEIFQSF INAAQELRPL
MDEQEQTLAD ALSSSNGTVD GYLNSSNPKT LMTLLPNEPE TGPAIIDGKP NDTKEFRPPY
L