Gene Snas_6003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6003 
Symbol 
ID8887224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6354972 
End bp6355493 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514722 
Protein GI291303444 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0110653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.045581 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG CGGAAAGATT GGACAAGCTT TCCATTAGGT CAAGTTCTCC GGATGGCAAT 
ATCCGTTCGA TTCTGACGGG GCGCACTAAT CTCAAGCTGG AGTTTCGGTC CGGTGGTTAT
GAGGCGTATA CCGAACGCGA ACTTGAACAT CAGTTGTCGC GGTTGGCGAC CTTGACGTGG
ACGAGCTATC GGCGTGGCTA CACCGAGATC GTGACCTCGG CGGGCCTGGA GGTCGTGTTC
GAGCCCGGCG ACGAGTGGAA CTCCCACGAC CGCGAGTACC AACAGGCGCG GCTGGAGGTC
GAGGGCCGGG GTGAGTCGGG CGACGGCACC GTCCGCACCC GGACGCAGGC GTTGTTGCGC
TGGCAGTTCA AGATCAAGGA CGGGACGGTG AAGCGGCTGC CCGAGGCCGA CTTCACCCGG
GAGGTGCTGG TGGCCGTGCG GCTGGCGATC AAGGACTACC GGTCCCAGTC GTCCGAGTTG
CGGCAGAAGT ACTTCGGTCC CGGGTTCGCG ATGGGAGGCT GA
 
Protein sequence
MNIAERLDKL SIRSSSPDGN IRSILTGRTN LKLEFRSGGY EAYTERELEH QLSRLATLTW 
TSYRRGYTEI VTSAGLEVVF EPGDEWNSHD REYQQARLEV EGRGESGDGT VRTRTQALLR
WQFKIKDGTV KRLPEADFTR EVLVAVRLAI KDYRSQSSEL RQKYFGPGFA MGG