Gene Snas_6002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6002 
Symbol 
ID8887223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6354476 
End bp6354961 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003514721 
Protein GI291303443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.431751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0431978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCA GCAAGCGGCG TCCGGCCGGG CAGGATCCGG ACCTCGACGA GGCGGTGCGG 
GCATTGCTGC TGCTCATGCC GCGCATGGTC GGTCGTGTGA AACGCATCCC CGTCCCCGAA
CAGCTGCGCT CGCTGGAACT GAGTCCGCGC CACCTGTCGA TGCTGGCCCT GATGCTGTTC
GACGGCCCGA TGACGGTCAA CCAGCTCGCC AACCGGCTGG AGGTCGCGCC GACGACGGTG
AGCCTGATGG TCAGCGAACT GAGCCGCAAG AACGTCCTGA CCCGGCTGGA GGACGAGAAC
GACCGCCGTC GCCGCATCAT CGACATCACC GACGCGACGC GCCCCGACAT CGAGACCTGG
CTGGCCAACG GCGCCCGAGC CTGGCACCAG GCGCTTGACC CGCTCACGCC CGAGCAGCGA
CGGCTGTTCA TCGACACCCT GCTCGCCTAC GAAACCGCCC TGGAGCGCAC CAACGCCGCC
GACTGA
 
Protein sequence
MTSSKRRPAG QDPDLDEAVR ALLLLMPRMV GRVKRIPVPE QLRSLELSPR HLSMLALMLF 
DGPMTVNQLA NRLEVAPTTV SLMVSELSRK NVLTRLEDEN DRRRRIIDIT DATRPDIETW
LANGARAWHQ ALDPLTPEQR RLFIDTLLAY ETALERTNAA D