Gene Snas_6001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6001 
Symbol 
ID8887222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6353504 
End bp6354349 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content71% 
IMG OID 
ProductNmrA family protein 
Protein accessionYP_003514720 
Protein GI291303442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0281153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC TCGTCACCGG AGCAAGCGGC AACATCGGCA GCCGGGTCGT GTCCACTTTG 
GCGGACACCG GATTCGCGGT GCGGGCCGCC GCGCGCGAAG CCGCCGCACT CGAGGTGCCG
GACGGCGTCG AGACCGTCAG CCTCGACATC GGTCAGCCGG GTGACGCCAC GGCGGTGCTC
GACGGCGTCG ACACGATCTT CCTCTACCCC ATTCGATCGG GCAGCCCGGA AGCACTGCTG
GCGGCGGCCC GCGAAGCCGG GGTGCGGCAC GTGGTGCTGC TGTCATCACC CGGGTCCTGG
GACGCTGGCG AACACGACCG CGTCATCGGG CAGGTCCATC AGGGCATCGA ACGGACGCTG
TCGGCCTCGG GGCTCGACCA CACGGTGCTC TATCCCAGCT GGCTGGCCAG CAACGCGCGC
CGCGACTGGG CGAACGACAT CCGCGACAGC GGCCGGGTCC GGCTCGCCTT CGCCGACGCG
CACGTGAACC CGATCCACAT CGACGACGTC GCCGAGGTGG CCGCCGACCT GCTGACCCGG
GAACGGTTCC GGGGCCGGAT GCAGGTGCTC ACCGGGCCGG AATCAATGCG GCTGCGCGAC
GTCGTGTCCG TCCTGGGCGA AGCGTTGGAC CGGCCGATCG GACTGGACGA GCTGACCCGC
GAGCAGGCAC TGGCCGAACG TCCGCCGCAC CTGCCCGAGG CGGTGCTGGA GACGCTGCTG
GACGTCATGG CCGCGGCCGT CGACGTCCCG GCGCTGGTCA ACAACAACGT CGAGCGGATC
ACCGGTCACC CGGCCCGGCC CTTCGGCCAG TGGGTGAGCG AACAGCGGGT CGCCTTCGCC
GCCTAG
 
Protein sequence
MTVLVTGASG NIGSRVVSTL ADTGFAVRAA AREAAALEVP DGVETVSLDI GQPGDATAVL 
DGVDTIFLYP IRSGSPEALL AAAREAGVRH VVLLSSPGSW DAGEHDRVIG QVHQGIERTL
SASGLDHTVL YPSWLASNAR RDWANDIRDS GRVRLAFADA HVNPIHIDDV AEVAADLLTR
ERFRGRMQVL TGPESMRLRD VVSVLGEALD RPIGLDELTR EQALAERPPH LPEAVLETLL
DVMAAAVDVP ALVNNNVERI TGHPARPFGQ WVSEQRVAFA A