Gene Snas_5995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5995 
Symbol 
ID8887216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6348190 
End bp6348633 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content67% 
IMG OID 
ProductDoxX family protein 
Protein accessionYP_003514714 
Protein GI291303436 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.158002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0523369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACA ACGCAACCCC CGCCCAGGAC ACCAAGCGCC CCGGCAAAGC CCTCAACATC 
ATCCTGTGGG TCTTGCAGGG CCTGCTGGCC GCGTTCTTCG TGTTCGCCTC GGCCCCCAAG
CTGCTGGGCG ACCCGACCGC CGTCGAGATG TTCGGCAAGA TCGACTTCGG CGACTGGTTC
CGCTACCTGA CCGGCATCGT CGAGCTGGCC GGCGCCATCG GCCTGGTCAT CCCGCGACTG
TCCAGCCTGG CCGCCAGCGG CCTGGCCATC GTGATGGTGT GCGCGACCGT CGCCAACCTC
ACCGCGCTCG AGATGGCCTG GGCGGCACCG CAGACGATCG TGCTGGCGGC GCTGTTCGTC
TTCATCGCCT GGGGCCGTCG CGACCAGAAC AAGCGACTGC TCGCCATGTT CAAGGGCTCC
AAGACCGAGC CGTCCTCCGT CTGA
 
Protein sequence
MSDNATPAQD TKRPGKALNI ILWVLQGLLA AFFVFASAPK LLGDPTAVEM FGKIDFGDWF 
RYLTGIVELA GAIGLVIPRL SSLAASGLAI VMVCATVANL TALEMAWAAP QTIVLAALFV
FIAWGRRDQN KRLLAMFKGS KTEPSSV