| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5992 |
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| Symbol | |
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| ID | 8887213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 6344423 |
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| End bp | 6345022 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003514711 |
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| Protein GI | 291303433 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.396143 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.47391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAGGC TCGTCAATCA CGCCGACCGC AAGAAACGGC TGGTGGAAGC CGTGTGGTCC
CTCGCCGTGC GCAACGGACT GGAAGGGGTG ACGCTGCGCA AGGTCGCCGC CGAGGCGGGT
GTGTCCATGG GACAGGTGCA GCACTACTAC CCGTCGATGA GCGACCTGGT GCAGGACGCG
ATGCGGCGCT CGGTGCTGGA ACTGAACGCC AAGATCGAGG CGGGCATCGC CGCGATCGAC
ACGGCCTCAG CCGAGGACAT GCTGCGGCAG TGCCTGTACG CGATGGTCCG GCTCGACGAG
GAGAGCGTCC GGCTGATCCG GTTCTCGCTG GCGGTGGTGG GCCGGGCCAT GTCCGACTCG
TCGATGGCGC AGATGCTGGC CCCCGCCGAC GACCAGCTGC GCGACTTCAC CGCCGGACTC
ATCACCGCCG CGCGCGTCGA ACGGGGCGTG GAGCGCGACG CCGACGCGCA CATCGACGCC
GACATCTGCT GGGCGGTCGC CGTCAGCCTC GGTGTGGACA TCGCGCTGGG CCACCGCGGC
GCCGAATCGG CGCTGGCGGT GCTGACCTAC CACATCGACC AGCTGCTGGC GGCGCGCTAG
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| Protein sequence | MPRLVNHADR KKRLVEAVWS LAVRNGLEGV TLRKVAAEAG VSMGQVQHYY PSMSDLVQDA
MRRSVLELNA KIEAGIAAID TASAEDMLRQ CLYAMVRLDE ESVRLIRFSL AVVGRAMSDS
SMAQMLAPAD DQLRDFTAGL ITAARVERGV ERDADAHIDA DICWAVAVSL GVDIALGHRG
AESALAVLTY HIDQLLAAR
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