Gene Snas_5986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5986 
Symbol 
ID8887207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6338936 
End bp6339436 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514705 
Protein GI291303427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.268183 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.461112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCTACT TCGCTGTCGC GGCCACTCGC GCCGACGACG TCTGGGAGGC CGCGGAGATT 
GATCTGGACT CGGTCGGCGA TCTCGACGAC GTGATCGACG TGGTACGTGA CGTCGATCCC
GAGGCTCAGA TTTCGCTGCT CTTCGTCGAA GCCGACGACG AGTACCTGGT GATCCTGCGT
CTGGATAACG GCGACGACGC ACGGGTCTTC GGTTCTGACG CGCCCTTCGC CGAGGAGAGC
CGGCTGGGCG CGGTGCTGCT GTCCGACATC GACGCGGATG TGGCTCCGGT GCCCAACGGG
GACGACGACC TCGAAACCCC CGTCATGAGC GAGCTGGACG CCCAGCCGGT CGGTGAGGCC
GACCTTCTGT CCGATCTGGG CGTAGCCGCG GCGACGCTGC TCAACCTGTG CGCCAAGGAC
GGCATGCTTC CGTCCGATGT GACCGCCGAG GTCGCGTCGC TGATCGGCTG CGGGGACGTC
GTCGACGAGG TCCACGATTA A
 
Protein sequence
MSYFAVAATR ADDVWEAAEI DLDSVGDLDD VIDVVRDVDP EAQISLLFVE ADDEYLVILR 
LDNGDDARVF GSDAPFAEES RLGAVLLSDI DADVAPVPNG DDDLETPVMS ELDAQPVGEA
DLLSDLGVAA ATLLNLCAKD GMLPSDVTAE VASLIGCGDV VDEVHD