Gene Snas_5978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5978 
Symbol 
ID8887199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6333708 
End bp6334541 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514697 
Protein GI291303419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.450085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGTCA CGGTGCTCAG CCTCGTCAAC GGCCCCACCG GTTGCGGAAC CCGCACCCCG 
GTGCTGGCCT GCGTCGACGC ACTCAAGGCC GCCGGAGCCC GGGTCGAACT GGCCGAGGCC
GATGACGACG CCGGGATCGA CACCGTCGTG ACCGGAGACG CCCGCATCGT CGTGGCCGCC
GACACCGACG CCCAGGTCCG GGCGGTACTG CGCCGGGCGG TGCGCTGCCT CGCCCCGCCG
CCCAGCTCCC GCCCCGACGA CCTGCCAGGC GACCGCACCG TGCCCGACCT GCCGCCGCTG
GCGATCCTGC CGCTGGCGCA GACCCCCGAC CTGGTGGCCG CCCTGAAGTT GCCCGACACC
CCCGAAGCCG TGGCCGCCGC CGTCATCGGC GGGGCCGTGA AACGCACCGA CCTGCTGCGC
AATGACGCCG GGGGCGTCAC CGTGCACGGC GTGCGCGTCG GCGGCGGGGA CACGCCGTGG
CGGGGCAAGA TCGCCCTCGA CGACGCGATC CTGACCGCGG GCCAGGAAGC GCTGGTGACC
TGCGTGGTCG CCAACGCCGA CGGCTACGGC GAGGTCGACG GGCTGCCGCT GTCGCAGCCC
GACCCGTGCG ACGGGAAACT CGACGTCGCG GTCGCGGTGC CCTTCGTCCA CCGGGGCCTG
TTCAAGCGGC GCACCCGCGT CGAGGTTCGC CGGGCCGCGG GCCGGGCGGT GGAGATCACA
CCCGTGGATC CGGTGCCGTT CGTCGACGAC GGTGTCGTCG GTGAGCTGCG ACGCAAGCGC
ACCTGGTGGA TGGAGCGCGC GGCGGCGGGC TGGTATGTCG ATGCCCCGGC GTGA
 
Protein sequence
MDVTVLSLVN GPTGCGTRTP VLACVDALKA AGARVELAEA DDDAGIDTVV TGDARIVVAA 
DTDAQVRAVL RRAVRCLAPP PSSRPDDLPG DRTVPDLPPL AILPLAQTPD LVAALKLPDT
PEAVAAAVIG GAVKRTDLLR NDAGGVTVHG VRVGGGDTPW RGKIALDDAI LTAGQEALVT
CVVANADGYG EVDGLPLSQP DPCDGKLDVA VAVPFVHRGL FKRRTRVEVR RAAGRAVEIT
PVDPVPFVDD GVVGELRRKR TWWMERAAAG WYVDAPA