Gene Snas_5972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5972 
Symbol 
ID8887193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6328920 
End bp6329882 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content68% 
IMG OID 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_003514692 
Protein GI291303414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.723565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.842062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTAT GGCTCGACCT CACCATCCGC CTGGCCGCGG TGGTGATCGC CTTCCTGACC 
CTGCCGCTGA TCGTCGGCCA GACCGAACAC AAGGTCATGG CCCACATGCA GGGCCGCCTC
GGCCCCATGT ACGCGGGCGC CTACCACGGC TGGGCACAGC TGATCGCCGA CGGCGTCAAG
TTCGTCCAGA AGGAAGAGGT GGCGCCGCGC GCCGCCGACA AGCCGGTCTT CAAACTGGCC
CCGCTGGTGG CACTGTTCCC GTACCTGGTC GCCCTGTTGG TGATCCCCTT GGGCCCCAAC
GACCTGGTGG CCCAACCCCT CGACATCGGC CTCTTCCTGG TACTCGCCAT CGTCGGGGTC
GGCATCGTCG CGGTCCTGAT GGCGGGCTGG GCCTCCGCCA ACAAGTACAC CCTCATCGGC
GCGATGCGAG CCGCCGCCCA GCTCCTCGGC TACGAACTCC CGTTCGTCCT GGCCGCCGCG
AGCGTCGCCA TGGCCGCGGG AACCCTCTCC CTGTCCGGCA TCGTCGAAGC CTGGAACCCG
TGGTGGCTGC TGTGGCAGGC CCCCGCCCTG TTCGTCTTCT TCATCGCGGG GCTCGCCGAG
ATCCGCCGTC CCCCCTTCGA CGCCCCGATC GCCGACTCCG AACTCGTCTT CGGCTACCTC
ACCGAGTACA CCGGCCTGCG GTTCGCGTTC TTCCTGCTCG CCGAATACGT CGGCATCGTC
GTCATCGCGG CCCTCACCAC CGTCCTGTTC CTCGGCGGCT GGCAGGGCCC CTTCCTCGAC
GCCCAACTCG GCTGGCTGTG GACGCTGATC AAGATCGGCG CGGTCTCCTT CGTCGTCATC
TGGCTCCGCG TCGCCTACCC CCGCCTGCGG GTCGACCAGC TCCAGAAACT GTGCTGGAAA
GTCCTCGTCC CGATCGCCCT GGGCCAGCTA GCCCTCACCG CCCTGGTCAA AGTAGCGATC
TGA
 
Protein sequence
MPVWLDLTIR LAAVVIAFLT LPLIVGQTEH KVMAHMQGRL GPMYAGAYHG WAQLIADGVK 
FVQKEEVAPR AADKPVFKLA PLVALFPYLV ALLVIPLGPN DLVAQPLDIG LFLVLAIVGV
GIVAVLMAGW ASANKYTLIG AMRAAAQLLG YELPFVLAAA SVAMAAGTLS LSGIVEAWNP
WWLLWQAPAL FVFFIAGLAE IRRPPFDAPI ADSELVFGYL TEYTGLRFAF FLLAEYVGIV
VIAALTTVLF LGGWQGPFLD AQLGWLWTLI KIGAVSFVVI WLRVAYPRLR VDQLQKLCWK
VLVPIALGQL ALTALVKVAI