Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5970 |
Symbol | |
ID | 8887191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6326980 |
End bp | 6328290 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003514690 |
Protein GI | 291303412 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.323905 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGCTA ACGCGGCCGA GCGCACCGAG CACATCATCG ATGTGTTCCT GACCGAGTTC GGCGAGCTCA TGAAGGCCGA TCCGAACGCC TTCCACCGGA AGTTCCGCAA GATGGCGGCC TCGCCGTTCG CGTTCTACCG GGGCAGCGCG TGTCTGTTCT ACTCCGACGT CAAGAACGAC GACTCCACCT TCCTGGACGA GAAGACCTCG CGGGTGTGGA TGCACGGGGA CCTGCACGCC GAGAACTTCG GCACCTACAT GAACGCCAAC GGCGTCCTGG TCTTCAACGT CAACGACTTC GACGAGGCCT ACGTCGGCCC GTTCACCTGG GACCTCAAGC GGTTCGCCGC CTCGGTGGCG CTCATCGGCT ACGCCAAGGC GCTGTCGGAC GACGACATCA CCCAGCTGGT CACCGCCTTC GCGCGCTCCT ACCTGGCCGA GCTGCGGCTC ATCGCCGCCC ACGGCGACGA CGCGATCGGC GAACTGACCC TCGACACCTC CGACGGTGAG CTGCGGGGCG TACTCCAGAA GGCGCGCTTG GGTTCCCGGC TGCACCTGCT GAACAAGCAG ACCGAGATCG TCGACTACGA ACGCAAGTTC ATGCTCGGCG GCGGCGCCTA CCCGGTGGAC GAGGCACAGC GCGCGAAGGT GCGCGACGCG TTCGCCCAGT ACCTGACCAC GCTGCCCGCG TCCCGCCACC AGCGGCCCAC GGAACTGCAG ATCAAGGACT TCGCGCTGCG CAAGGGCGTC GGCATCGGCT CGGCCGGACT GCCGTCCTAC AACGTGCTGC TGGAGGGCAA CAGCCAGGCG CTGGAGAACG ACATCATCGT CTACATGAAA CAGGCGCAGG TGCCCGCGGT CAGCCGGGTC ATCGACGACG AGCGGATCAC CAAGTACTTC AGGCACCAGG GGCACCGCAC CGCCGAGTCC CAGCACGCGC TCCAGTCCTA CGCCGACCCG TGGTGCGGTT ACACCGAACT GGACGGTGTC GGCCAGTTCT GCGCCGAGGT CTCGCCGTAC GCCGCCGACC TCGACTGGTC CAACCTGGAC GAACCCGAGG AGATGGCCCC CGTCGTGGCC TACCTGGGCC GCGCGGTGGC CCGGATGCAC TCGGTGGCCG ACGACGACTC CGAACACGGC CTGGTCAACT ACTCCACCGA GGACGCGATC GCGGCGGCGA TCGGCGACGA CGACGCCGGG TTCACGTCCC TGCTGGTCGA CTTCGCCCAC CGCTACGGCC AGCGCGCCCG CGCCGACCAC CAGCTGTTCG TCGACCTGTT CCGCAACGAC AGGCTGCCAA CGGAAGGCTG A
|
Protein sequence | MTANAAERTE HIIDVFLTEF GELMKADPNA FHRKFRKMAA SPFAFYRGSA CLFYSDVKND DSTFLDEKTS RVWMHGDLHA ENFGTYMNAN GVLVFNVNDF DEAYVGPFTW DLKRFAASVA LIGYAKALSD DDITQLVTAF ARSYLAELRL IAAHGDDAIG ELTLDTSDGE LRGVLQKARL GSRLHLLNKQ TEIVDYERKF MLGGGAYPVD EAQRAKVRDA FAQYLTTLPA SRHQRPTELQ IKDFALRKGV GIGSAGLPSY NVLLEGNSQA LENDIIVYMK QAQVPAVSRV IDDERITKYF RHQGHRTAES QHALQSYADP WCGYTELDGV GQFCAEVSPY AADLDWSNLD EPEEMAPVVA YLGRAVARMH SVADDDSEHG LVNYSTEDAI AAAIGDDDAG FTSLLVDFAH RYGQRARADH QLFVDLFRND RLPTEG
|
| |