Gene Snas_5970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5970 
Symbol 
ID8887191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6326980 
End bp6328290 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514690 
Protein GI291303412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.323905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTA ACGCGGCCGA GCGCACCGAG CACATCATCG ATGTGTTCCT GACCGAGTTC 
GGCGAGCTCA TGAAGGCCGA TCCGAACGCC TTCCACCGGA AGTTCCGCAA GATGGCGGCC
TCGCCGTTCG CGTTCTACCG GGGCAGCGCG TGTCTGTTCT ACTCCGACGT CAAGAACGAC
GACTCCACCT TCCTGGACGA GAAGACCTCG CGGGTGTGGA TGCACGGGGA CCTGCACGCC
GAGAACTTCG GCACCTACAT GAACGCCAAC GGCGTCCTGG TCTTCAACGT CAACGACTTC
GACGAGGCCT ACGTCGGCCC GTTCACCTGG GACCTCAAGC GGTTCGCCGC CTCGGTGGCG
CTCATCGGCT ACGCCAAGGC GCTGTCGGAC GACGACATCA CCCAGCTGGT CACCGCCTTC
GCGCGCTCCT ACCTGGCCGA GCTGCGGCTC ATCGCCGCCC ACGGCGACGA CGCGATCGGC
GAACTGACCC TCGACACCTC CGACGGTGAG CTGCGGGGCG TACTCCAGAA GGCGCGCTTG
GGTTCCCGGC TGCACCTGCT GAACAAGCAG ACCGAGATCG TCGACTACGA ACGCAAGTTC
ATGCTCGGCG GCGGCGCCTA CCCGGTGGAC GAGGCACAGC GCGCGAAGGT GCGCGACGCG
TTCGCCCAGT ACCTGACCAC GCTGCCCGCG TCCCGCCACC AGCGGCCCAC GGAACTGCAG
ATCAAGGACT TCGCGCTGCG CAAGGGCGTC GGCATCGGCT CGGCCGGACT GCCGTCCTAC
AACGTGCTGC TGGAGGGCAA CAGCCAGGCG CTGGAGAACG ACATCATCGT CTACATGAAA
CAGGCGCAGG TGCCCGCGGT CAGCCGGGTC ATCGACGACG AGCGGATCAC CAAGTACTTC
AGGCACCAGG GGCACCGCAC CGCCGAGTCC CAGCACGCGC TCCAGTCCTA CGCCGACCCG
TGGTGCGGTT ACACCGAACT GGACGGTGTC GGCCAGTTCT GCGCCGAGGT CTCGCCGTAC
GCCGCCGACC TCGACTGGTC CAACCTGGAC GAACCCGAGG AGATGGCCCC CGTCGTGGCC
TACCTGGGCC GCGCGGTGGC CCGGATGCAC TCGGTGGCCG ACGACGACTC CGAACACGGC
CTGGTCAACT ACTCCACCGA GGACGCGATC GCGGCGGCGA TCGGCGACGA CGACGCCGGG
TTCACGTCCC TGCTGGTCGA CTTCGCCCAC CGCTACGGCC AGCGCGCCCG CGCCGACCAC
CAGCTGTTCG TCGACCTGTT CCGCAACGAC AGGCTGCCAA CGGAAGGCTG A
 
Protein sequence
MTANAAERTE HIIDVFLTEF GELMKADPNA FHRKFRKMAA SPFAFYRGSA CLFYSDVKND 
DSTFLDEKTS RVWMHGDLHA ENFGTYMNAN GVLVFNVNDF DEAYVGPFTW DLKRFAASVA
LIGYAKALSD DDITQLVTAF ARSYLAELRL IAAHGDDAIG ELTLDTSDGE LRGVLQKARL
GSRLHLLNKQ TEIVDYERKF MLGGGAYPVD EAQRAKVRDA FAQYLTTLPA SRHQRPTELQ
IKDFALRKGV GIGSAGLPSY NVLLEGNSQA LENDIIVYMK QAQVPAVSRV IDDERITKYF
RHQGHRTAES QHALQSYADP WCGYTELDGV GQFCAEVSPY AADLDWSNLD EPEEMAPVVA
YLGRAVARMH SVADDDSEHG LVNYSTEDAI AAAIGDDDAG FTSLLVDFAH RYGQRARADH
QLFVDLFRND RLPTEG