Gene Snas_5966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5966 
Symbol 
ID8887187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6324710 
End bp6325153 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content63% 
IMG OID 
Productpreprotein translocase SecE subunit 
Protein accessionYP_003514686 
Protein GI291303408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.741704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.926785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACG ACGACAGCCG CAGCGAGGAC GCCGAGAAGC GTCCCGGCAA GTCCTCCAAG 
CCGTCCAAGC GGCCCTCGAA GTCGGAGGAC GCCAAGGCCA AGGCGGGCAA GAAGTCCGAC
AAGAAGTCCG ACAAGGCTGA CGACGACGCC AAGCCGGACA AGGTCGAGAA GTCCGAGAAG
GGCAAGGCCG TCAAGACCGC CGCCAAGTCC GAGGCGAAGG ACGACAAGCC CAAGAAGAAG
CCCGGCCTGC TGCGCCGTTT CGGCATCTTC ATCCGCGAGA TCTTCGAGCA GCTGCGCAAG
GTGGTCTATC CGACCCGCAA GCAGCTGCTG ACCTACACCG CCGTCGTGCT GGTCTTCGTG
ACGATCATGA TCGGCGTGAT CTACGGCCTG GACTACGTGA TGTCCAAGGG CGTCATGTGG
GTGTTCGGCG GGAACGACAA GTAG
 
Protein sequence
MADDDSRSED AEKRPGKSSK PSKRPSKSED AKAKAGKKSD KKSDKADDDA KPDKVEKSEK 
GKAVKTAAKS EAKDDKPKKK PGLLRRFGIF IREIFEQLRK VVYPTRKQLL TYTAVVLVFV
TIMIGVIYGL DYVMSKGVMW VFGGNDK