Gene Snas_5961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5961 
Symbol 
ID8887182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6321311 
End bp6321847 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID 
Product50S ribosomal protein L10 
Protein accessionYP_003514681 
Protein GI291303403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.527483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.892445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAA AAGTGTTTCC CGCCGACAAG GTCGCCGCGG TGACCGAACT GACCGAGAAG 
TTCCGCGACT CCAACGCCAC CGTGCTCACC GAGTACCGGG GGCTCTCGGT GCCGCAGCTG
AAAGCCCTGC GCCAGGCGCT GGGTGAAGGA GCCTCCTACC GGGTCGCCAA GAACACCCTC
GCCAAGCGGG CCGCGTCCGA CGCCGGACTG TCCGACCTGG ACGAGTACTT CACCGGCCCG
ACCGCGCTGA CCTTCGTCAC CGGAGAGGTC GTCGACGCCG CCAAGGCCCT GCGTGACTTC
GCCAAGGACA ACGAGGCGCT GGTCATCAAG GGCGGCGTGA TGGACGGTCT GCCCGTCAGC
GCCGACGAGA TCAAGAAGAT CGCCGACCTT GACTCCCGCG AGGTTCTGCT GTCCAAGATG
GCTGGTGCCA TGAAGGGCAG CATGTCCAAG GCCGCGGCCC TGTTCGCCGC TCCCGCGTCG
CAGGTGGCCC GCATGGCCGC CGCGCTGCGC GACAAGAAAG AAGCCGCGGG CGAGTAA
 
Protein sequence
MAEKVFPADK VAAVTELTEK FRDSNATVLT EYRGLSVPQL KALRQALGEG ASYRVAKNTL 
AKRAASDAGL SDLDEYFTGP TALTFVTGEV VDAAKALRDF AKDNEALVIK GGVMDGLPVS
ADEIKKIADL DSREVLLSKM AGAMKGSMSK AAALFAAPAS QVARMAAALR DKKEAAGE