Gene Snas_5953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5953 
Symbol 
ID8887174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6314338 
End bp6315669 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content74% 
IMG OID 
ProductUDP-N-acetylglucosamine 
Protein accessionYP_003514673 
Protein GI291303395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACAG CTCCCCGCTC ACAGTTGAAC CGCGCCATCG CCCCGTGCCG CAAACGCGGC 
CCCCGTCGGG TGGCGATGGT GTCGATGCAC ACCTCCCCGC TGGAACAGCC GGGAACCGGG
GACGCCGGCG GCATGAACGT GTACGTGCTC CAGACCGCGC GCCGACTGGC CGACCGGGGC
GTCGCGGTCG AGATCTTCAC CCGCGCCACC TCCAGCGAAC AGCCCCCCGC GCTGTCGCCG
TCCGAGGGCA TCACGGTCCA CTATGTTCCC GCGGGTCCGT TCGAGGGTCT GTCCAAAGGC
GACCTCCCGT CCCAGTTGTG CGCCTTCACC AACGGTGTCC TGCGCGCCGA GGCCGCCCAG
CCGCCCGGCT ACTTCGACGT CATCCACAGC CACTACTGGC TGTCCGGCCA GGCCGCCTGG
CTGGCCGCCG AACGCTGGGG CGTGCCGCAC ATCCACTCCG CCCACACCCT CGCCAAGGTC
AAGAACCTGC ACCTGGCCGC CGAGGACACC CCCGAGCCCT TCACCCGGGT CGTCGGCGAG
GAGCAGGTCG TCGCCGAATC CGACGCCCTG GTCACCAACA CCTCCTCCGA GGCCGAGGTC
CTGGTCGACC TCTACCGGGC CGACCCCGAC AAGGTCACCG TCACGCCGCC CGGCGTCGAC
CCCGAGGTGT TCACTCCCGG CGACAAGCTC GCCGCCCGCC GCCGCCTCGG CCTGCCCGAC
GACGCCCTGG TCCTGGGCTT CGCGGGCCGG ATCCAGCCCC TCAAGGCCCC CGACGTGCTG
GTGCGCGCGG TGGCCCGGCT GCGCGCCCTC AACCCGGAAC TGGCGCCCCG GCTGCGGCTG
GTCGTGGTCG GCGGGCCCTC CGGCAACGGC GCCGACAACC CGCGCTGGCT GCACGACCTG
GCCGCCGAGC TGGGCATCGC CGACGCCGTC ACCTTCCTCA AGCCCCGCGC CGGACACGAA
CTCGCCGAGG TCTTCCGGGC CTGCGACGTC GTCGGCGTCC CCAGCTACAA CGAGACCTTC
GGGCTGGTGG CCCTGGAGGC CCAGGCCTGC GGCACCCCGG TGGTGGCGGC GGCCGTCGGC
GGCCTCACCA CCGCCGTGGC CGACGGGCAC AGCGGCCTGC TCATCCGCGG CCACGACGAG
ACCGACTGGG CCAACGCCCT GGACAAACTC GTCACCGACG CCCCCCGCCG GGCCCGGCTG
GCCGCCGGCG CCCTCGACCA CGCCGCCAGG TTCACCTGGT CCCACACCGC CGACGACCTG
CTGGGCGCCT ACGGCGACGC GATCCAGCGC CGCGCGGTGT CACCCCGCCG CTCCCCCGCC
TCGAAGCGCT AA
 
Protein sequence
MRTAPRSQLN RAIAPCRKRG PRRVAMVSMH TSPLEQPGTG DAGGMNVYVL QTARRLADRG 
VAVEIFTRAT SSEQPPALSP SEGITVHYVP AGPFEGLSKG DLPSQLCAFT NGVLRAEAAQ
PPGYFDVIHS HYWLSGQAAW LAAERWGVPH IHSAHTLAKV KNLHLAAEDT PEPFTRVVGE
EQVVAESDAL VTNTSSEAEV LVDLYRADPD KVTVTPPGVD PEVFTPGDKL AARRRLGLPD
DALVLGFAGR IQPLKAPDVL VRAVARLRAL NPELAPRLRL VVVGGPSGNG ADNPRWLHDL
AAELGIADAV TFLKPRAGHE LAEVFRACDV VGVPSYNETF GLVALEAQAC GTPVVAAAVG
GLTTAVADGH SGLLIRGHDE TDWANALDKL VTDAPRRARL AAGALDHAAR FTWSHTADDL
LGAYGDAIQR RAVSPRRSPA SKR