Gene Snas_5949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5949 
Symbol 
ID8887170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6310379 
End bp6310900 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content71% 
IMG OID 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_003514669 
Protein GI291303391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.151681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTTA CCGACGTGCT GCTGGTCGCC TTCGGCCTGC TCACGCTGGG CGCGGCCGTC 
CGGGTCGTGA CGACCGCGCA CCTGGTGCGG GCGGGCCTGT GGCTGGTGGT GGCGCTCGGT
GGACTGGCGG CGTGTTTTCT GGTGCTGACC GCCGAGCTCG TCGCGTGGGT GCAGGTGCTG
ATCTACGTGG GCGCGGTCGT GGTGCTGTTG CTGTTCGCCG TCATGCTGAC CCGCGCCCCG
ATCGGCGCGA GTCCCGAGAT GGACCGGGCC CGGTGGCCGG GAGCGATCGT GGGTGCCGCC
GCCGGACTGG GGTTGTCGGT GCTGTTGGCC GACGCGTTCC GGTGGACCTC GATCGACGCC
CAGGCCGTCG AACCCGGGAC CGCGAAGCGG CTGGGCACCG AGATCTTCGG CAACTGGGTG
CTGCCGTTCG AGCTGCTGTC GGTGCTGCTG CTGGCGGCGC TGGTGGGCGC GATCCTGGTG
TCCGCCAAGC AGAAGCGGGA CGGTCAGAGC GCCAGCCGGT AG
 
Protein sequence
MTVTDVLLVA FGLLTLGAAV RVVTTAHLVR AGLWLVVALG GLAACFLVLT AELVAWVQVL 
IYVGAVVVLL LFAVMLTRAP IGASPEMDRA RWPGAIVGAA AGLGLSVLLA DAFRWTSIDA
QAVEPGTAKR LGTEIFGNWV LPFELLSVLL LAALVGAILV SAKQKRDGQS ASR