Gene Snas_5945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5945 
Symbol 
ID8887166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6306212 
End bp6307303 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content72% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003514665 
Protein GI291303387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.309927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCCCGG TGTTCCTGGT CGGGGGCCTG AGCGTTCAGA TCGGTCAGGA ACTGCACTTC 
ACGCCCTCGG GGCTCGGCCT CGCCGTGGCC TCCTACTTCA CCGCCAGCGC CCTGGCCAGT
TTCTGGGCCG GACGGCTGGT GGAGCGGATG GGCTCGAAGT TCGTCGCCAA GGCGGCGATC
CTGCTGGCGG CCGGGTCGCT GGCGGCGATC GCCGTGGCCG CCCGCGACCT CACCTCGCTG
ACGCTGCTGC TGGTCCTGGC CGGACCGGCC AACAGTCTGG GCCAGCTGTC GTCCAACGCG
CTGTTGGCCC GCAAGGTGCC ACCCAAACGC CGGGGACTCA TGTTCGGCGT CAAACAGGCC
GCGATTCCAC TGTCGACGAC GCTGGCGGGC CTGGCGGTGC CGATCGTGGC GCTGACGGTG
GGCTGGCGCT GGGGTTTCGG CGTGGCCGCG GTGCTGGCGC TGCTGGCCTG GCCGGTGCTG
CCCAGGACCG AGGAGGCCGG GCCACAGCCC GGACGGCCGA AGCCGCAGCT GCGTCCCAAC
GCCACCCTCG TGGTCATCTC GCTGGCCGCC TGCCTGGGCG CCACCGCCGC CAACCCGGTC
GGCTCGTTCA TCGCCGATTA CGGTGTCTCG CAAGGAATGT CGGAGTCGCT GTCCGGACTC
AACCTGACCC TCGGCGGCCT GGCGGGCGTC GCGGCCCGCA CCACGGTCGG CTGGATGGCC
GACCGCCGCG ACTCCGGTCG GCTGGTCATG ATCGCGGTGA TGCTGGCCGT CGGCTCCGCC
GGGCTGGCGC TGCTGGCGGC CCCCGGCGTG TGGACGATCC CGATCGGCAC CGTCGCGGGC
TTCGCGCTCG GCTGGGCCTG GCCCGGGCTG CTGAACTTCG CCATCACGCT GCGGTACTCG
CAGGCCCCGG CCGCCGCCAC CGGCATAACC CAGATCGGCG TCTACATCGG CGGCGGCCTC
GGACCGCTGG CCTTCGGGGC GCTCGTGGAT GCCTGGGGCT ACCCGGTCGG CTGGCTCACC
ATGGCGGTGC TGATGCTGGC CGGTGCCGTC CTCATGATCG TCGGCCGCCG CATGTTGCTG
ACAACCACCT GA
 
Protein sequence
MCPVFLVGGL SVQIGQELHF TPSGLGLAVA SYFTASALAS FWAGRLVERM GSKFVAKAAI 
LLAAGSLAAI AVAARDLTSL TLLLVLAGPA NSLGQLSSNA LLARKVPPKR RGLMFGVKQA
AIPLSTTLAG LAVPIVALTV GWRWGFGVAA VLALLAWPVL PRTEEAGPQP GRPKPQLRPN
ATLVVISLAA CLGATAANPV GSFIADYGVS QGMSESLSGL NLTLGGLAGV AARTTVGWMA
DRRDSGRLVM IAVMLAVGSA GLALLAAPGV WTIPIGTVAG FALGWAWPGL LNFAITLRYS
QAPAAATGIT QIGVYIGGGL GPLAFGALVD AWGYPVGWLT MAVLMLAGAV LMIVGRRMLL
TTT