Gene Snas_5944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5944 
Symbol 
ID8887165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6304980 
End bp6305786 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003514664 
Protein GI291303386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC GTAATTTGTC AGGCTCGGCC CCGAATCCCA AGCCAAAACC CGAACCCAGC 
GATTTGATTC GCAGCGTTCA GCGTGCGCTG CGGGTCATGG AGGTCGTCGG TGACGTACCC
AGTGGTCTGA GCGCGAAACA GATCGCCAGA CGGTGCAGCC TCAACCTGCC GACGACGTAT
CACCTGGTCC GCACCCTGGC CTATGAGGGC TATCTGATCC GAGGTAAGAA CGGCATCTTT
CAGGTGGGGC TGGCGCTGTC CGACCGCTAC GCCGATCTGG CCAAGGCGAT GAAGGGCCCG
GCGACCGTCG GCGAGGTACT GCGCCGCACG GTCGGCGACA CCGGTTACAG CCACTACCTC
GGCAAGATCG TCGACGGACG CGCGGCGGTC ACCGCGGTGA GCGAGGGGTC GCGCTCGCCG
CACGTGGAGG ACCTGATCGT CGGTTTCGAC GACGGCGCCC ACGCGCACGC GCTCGGCAAG
GCCCTGCTGT CGACGATGAC GGTGCAGGAC CGCAGCGGTT ATCTGCGGGA ATCCGGGATG
CGCCGCTACA CCGACCACAC CATGACCGAG CCCGGCGCAC TCGAATACGA CCTGGCACAG
CGCGCCGCCA GCGGCGTCTT CACCGAGGTC AACCAGTTCT ATCCCGGGGT CGGCTGCGCC
GCGACGGTCG TCAACGACAG TCCCGAACCC AGTAAGCGCA CCGTCATCGC CTGCACGATG
CCGCTGCACG AACTGCGGAT GAACGGCGCG ATGGTGAAGA CCCGGCTGCG TCGCGCGGCC
GAAGAGCTCG GAGCGCTGGA CGACTGA
 
Protein sequence
MTERNLSGSA PNPKPKPEPS DLIRSVQRAL RVMEVVGDVP SGLSAKQIAR RCSLNLPTTY 
HLVRTLAYEG YLIRGKNGIF QVGLALSDRY ADLAKAMKGP ATVGEVLRRT VGDTGYSHYL
GKIVDGRAAV TAVSEGSRSP HVEDLIVGFD DGAHAHALGK ALLSTMTVQD RSGYLRESGM
RRYTDHTMTE PGALEYDLAQ RAASGVFTEV NQFYPGVGCA ATVVNDSPEP SKRTVIACTM
PLHELRMNGA MVKTRLRRAA EELGALDD