| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5931 |
|---|
| Symbol | |
|---|
| ID | 8887152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6291462 |
|---|
| End bp | 6292643 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003514651 |
|---|
| Protein GI | 291303373 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0299912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGGT ACTACTTCCT CACCGGAACC GGCACCGCGC TATGGGGCGC GACGCTGCCC
GCGACCGACG CGCGGCTCGA TCTGGGCTCG GGCCGGTTGG GAACGGTCCT GCTGGTGCTG
GGCCTGGGCG CGGCGGTCGC CATGCCCGGT GCCGGATGGC TGGCCGACAG GTGGGACCGG
CAGCGACTGC TTCGGTTGGC GGCCTTGGGA AGCGCCGTGG CCCTGGCGGG TCCGGCGCTG
GCGGGTTCGT TCGGCTGGCT CGTCGCGGCG GCGGCGGTTC TGGGACTTGC CATGGGCGCC
CTGAACGTCG CGCTGACGCT CCAGGTCGTA CACATCGAAC GCCGCTTCGC GGTCGGGGTC
ATGTCGACGA TGCACGGCAT GTGGACACTC GGCGCCGTCC TGGGTGGACT GGTGACCACG
TTCGCGTTGC GGGCCGGGGC GGACGTGCGG CTGTTCCTCG GCGTGGCCGG GATCGTCCTG
GCGGTCGTGT TCCTGGTCCC CGGGAAACTG TTGGGGCGCT TCGACACCGT CGCCGCCACC
GAGACCGGCC CCAGCGGTTC CGGCGGTCCC GGATTCGGGT TGCTGCTGGC GCTGGGGGTC
ATCGGGGCGG CGGCGTTCCT CACCGAGGGT GCCGCGACCG ACTGGGCCGG GATCCACGTG
CGCCGGGTGC TCGGCGCCGA ACCGGCCACG GCCTCGCTGG TCTACACGAT CTTCTTCGCG
GCGATGACCG TGATGCGCTT CGCCGGGGAC GGGCTGCGAG GACGGCTTGG CCCGGCGCTG
ACGCTCCGGC TGGCCTGCCT GACGGCGTCC GCCGGTTACG GGCTGGTGCT GCTGGCCCCG
GCGACGGGCT CGGTGCGGGT CGCCACGGCC GCCGCCGGGT GGGTGTTCGC CGGTGCCGGG
ATGGCGCTGG TGTGGCCGGT GGTGTCCAGC GCCATGGGGG CCGGGGCATT CAGCGGTCGG
CGGCTGTCGA CGGTGACGAC CATCAGCTAC ACCGGCGGCC TGATCGGCCC GGCGGTGATG
GGTTTCATCG CCTCGGCGAG CTCACTGCCG ACGGCGCTGA CGATCCCGTT CGTCCTGGCC
GTAGCCGTCG CGGTGATCGC CCCGGCGGTG GTCACCGCCA CGATTCGCGG CCGCCGTGTC
GATTCGGGGG TCTCCCGTTC GACGTATGAG CAGACAGCGT GA
|
|---|
| Protein sequence | MAGYYFLTGT GTALWGATLP ATDARLDLGS GRLGTVLLVL GLGAAVAMPG AGWLADRWDR
QRLLRLAALG SAVALAGPAL AGSFGWLVAA AAVLGLAMGA LNVALTLQVV HIERRFAVGV
MSTMHGMWTL GAVLGGLVTT FALRAGADVR LFLGVAGIVL AVVFLVPGKL LGRFDTVAAT
ETGPSGSGGP GFGLLLALGV IGAAAFLTEG AATDWAGIHV RRVLGAEPAT ASLVYTIFFA
AMTVMRFAGD GLRGRLGPAL TLRLACLTAS AGYGLVLLAP ATGSVRVATA AAGWVFAGAG
MALVWPVVSS AMGAGAFSGR RLSTVTTISY TGGLIGPAVM GFIASASSLP TALTIPFVLA
VAVAVIAPAV VTATIRGRRV DSGVSRSTYE QTA
|
|---|
| |