Gene Snas_5930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5930 
Symbol 
ID8887151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6290548 
End bp6291351 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514650 
Protein GI291303372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.615231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACCC TGAACTCCCC CGACGGAACC GAGGTCCTGG CCGCCGTTGA CGGCCGCGGG 
CCGGTCATCC TGTTCCTGCA CGCCGGAATG GACAGTGAGA CCGCGTGGGC CCGGCCCGCG
CGACGGCTCG CGGATCGGTT CCGGACGCTG CGCGTCCGGC GACGTCGCTA CCGGCTCGAC
CTGACCGACG AGGTCGCGCG GTCTCTCGCC AGCGAGGTCG ACGACGTGGC GGCCCTGGCC
CGGGCGATGG ACGCGCCGGT CCTGCTCGTC GGTCATTCCT CGGGCGCGGT GGTCGCGCTG
GAGGCCATGG TCGCCGCGCC GTCGTCGTTC GCCGGGGCGG TGCTGTACGA GCCGCCAATC
GTGACCGGGC CGCCGTTGGG CGGCGAGGCG CTGGTCCGGG CGCGGGCCGC GGTCGCCGCC
GGGAAACCGG GAGCCGCGAT CGCCGGGTTC GTCCGGGACG TGGTGGGAAT GCCCGGCTGG
ATCGCGCGAG CGGCCGGGAT GTACGCGGCC GTGTCGCCGC GGATGCGGGC ACTGGTGCCG
CGCCAGGTCG AGGAACTGGC GGCGATCGAC GAGCTGGGGA ACCGGCTGGA TGCCTACGCC
CGCATCGATT CGCCGGTACT GCTGCTGGGC GGCGAACGCA GTCCGGCCAA TCTCGCCCAC
CGCCTCGACG CGCTGGCGGC GGTGCTCCCC CACGCGGAGC GGCGGACGCT GCGCAAGTTG
GGGCACGACG GCAACCGGCG CTCGCCCGGG ATGCTCGCCG GTGTCATCGC CGAGTTCGCC
GATCGGGTGC TGAACCACGA TTGA
 
Protein sequence
MFTLNSPDGT EVLAAVDGRG PVILFLHAGM DSETAWARPA RRLADRFRTL RVRRRRYRLD 
LTDEVARSLA SEVDDVAALA RAMDAPVLLV GHSSGAVVAL EAMVAAPSSF AGAVLYEPPI
VTGPPLGGEA LVRARAAVAA GKPGAAIAGF VRDVVGMPGW IARAAGMYAA VSPRMRALVP
RQVEELAAID ELGNRLDAYA RIDSPVLLLG GERSPANLAH RLDALAAVLP HAERRTLRKL
GHDGNRRSPG MLAGVIAEFA DRVLNHD