Gene Snas_5906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5906 
Symbol 
ID8887124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6266319 
End bp6267182 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514627 
Protein GI291303349 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCCCC TCGCCCTGCT CCTGGTCGGT GCCGCCGCCG TCTGTCACGC CCTGTGGAAC 
CTGGCGGCCA AACGCGCCTC CGACGGCGGG CCGGTGTTCG TGTGGCTCAA CACCGTCGCC
TCGGCCGTCA TCTACCTGCC GCTCGTGGCA GTACTGGTCG TCATCCAGCC GCCCCGGTGG
AACTGGACGC TGCTGGTGGC CATCCTCGTC ACCGGAATAC TCCACAGTGG CTATTCGGTG
ATCCTGCAGC GCGGCTACCA GCACGGCGAC CTGTCGGTGG TCTACCCGCT GGCCAGGGGC
ACCGGCCCGG CGCTGTCGGT CGGCTTCGCC ATCGTCTTCC TGGGCGAACG CCCCGGCCTG
ATCGGCTTCC TCGGCGCGCT CGGGGTGGTG GCGGGCATCC TCGTCATCGG CCTCGGCAAG
GCCGGGAAGG GAACCAAACT CACCGCCGGA ATCGGTTACG GTCTGCTGAC CGGTGTGTTC
ATCGCCTCAT ACACGGTGTG GGACGCGTGG GCCGTGGGCC CGCTAGCCAT CTCGCCGATC
CTGTACGACT GGGGCAACAA CATCGTCCGG GGCACGATCC TCACCCCCTA CGCGCTGCGC
CGACGCGCCG AGATCCGCCG AGTCTGGACG CAACACCGCT CCTCGGTGTT CATCGTCGCC
ACCATCGCCC CGGCCGCCTA CATCCTCGTC CTGTTCGCCT ACCGCTTCGC CCCCGTCAGC
CTCGTCGCCC CGGCCCGCGA ACTCAGCATC GTCATCGGCA GCGTCTTCGC GTGGCTCCTG
TTGCGCGAAC CCCAAGCGGG ACGGCGCATC GCCGGAGCGG TCGTCGTCCT GCTGGGAGTG
GCCGCGCTGG CCGTCGCCAG ATGA
 
Protein sequence
MDPLALLLVG AAAVCHALWN LAAKRASDGG PVFVWLNTVA SAVIYLPLVA VLVVIQPPRW 
NWTLLVAILV TGILHSGYSV ILQRGYQHGD LSVVYPLARG TGPALSVGFA IVFLGERPGL
IGFLGALGVV AGILVIGLGK AGKGTKLTAG IGYGLLTGVF IASYTVWDAW AVGPLAISPI
LYDWGNNIVR GTILTPYALR RRAEIRRVWT QHRSSVFIVA TIAPAAYILV LFAYRFAPVS
LVAPARELSI VIGSVFAWLL LREPQAGRRI AGAVVVLLGV AALAVAR