Gene Snas_5904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5904 
Symbol 
ID8887120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6263706 
End bp6264401 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content66% 
IMG OID 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003514625 
Protein GI291303347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.640348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGGGGAACGG TTCCCCTTGG CCCACAAAGA AAGGCATAGA AGTGAAATCC 
TCACTGTCAA CCCGAATCGC GGCGCTTGCC GCCGTCGCCG GACTCGCGTT CACGCTGACC
GCCTGCTCCG GGGACTCCGG CGCCGACGAC AAGAAGGCGA ACGACGACCA GTCGCAGGCC
AAGGACTCCG ATTCCGAATC CGACACCGGC CAGGCATTCG GTCCCGCCTG CGCCGACATT
CCCAAGGACG GCGACGGCAG CTTCGACGGC ATGGCCAAGG ACCCGGTCGC CACGGCGGCC
AGCAACAACC CGGCGCTGTC GACGCTCGTC GAGGCCGTCA CCGCCGCCGA CCTGGCCGAC
ACCCTGAACT CCTCGGAGAA CATCACGGTG TTCGCGCCCG CCAACTCCGC CTTCGAGAAG
GTGCCCGAAA AGGACCTCGC GGCGTTGTTG AAGGACAAGG AGAAACTGAC CGAGGTCCTC
ACGTACCACG TCGTGGGTGA GACCGTCTCG CCCGACAAAC TGGGCACCGC TGGCCCGTTC
GAGAGCCTGC AGGGAGCCGA CATCGAGGCC GCCGGGTCCG GAGAGGACTA CACCGTCAAC
GGTGACGCCA AAGTGGTCTG CGGCAACGTC GAGACCGCCA ACGCCACCGT GTACATCATC
GACACCGTGC TGATGCCGCC TGCCGACGAC AAGTGA
 
Protein sequence
MTATGNGSPW PTKKGIEVKS SLSTRIAALA AVAGLAFTLT ACSGDSGADD KKANDDQSQA 
KDSDSESDTG QAFGPACADI PKDGDGSFDG MAKDPVATAA SNNPALSTLV EAVTAADLAD
TLNSSENITV FAPANSAFEK VPEKDLAALL KDKEKLTEVL TYHVVGETVS PDKLGTAGPF
ESLQGADIEA AGSGEDYTVN GDAKVVCGNV ETANATVYII DTVLMPPADD K