Gene Snas_5899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5899 
Symbol 
ID8887115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6258817 
End bp6260109 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514620 
Protein GI291303342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.476132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCT ATACCAGCCA GCTTCTGCTG GTGCTGGTTC TGATCGTATT GAACGCGGTT 
TTCGCCGGAT CCGAGATGGC GCTGGTGAGT TTGCGCGACT CCCAGATCCA GCGGCTGGAG
CGGACCAGCC GGGGCGGACG GGTGCTGGCC AAGCTGGCGC GCGATCCCAA CCGGTTCCTG
TCCACCATCC AGATCGGCAT CACGCTGGCG GGTTTCCTGG CCTCGGCCGC CGCCGCGGTG
ACGCTGGCCA AGCCGCTGGT CGAACCGCTG GGCTTTCTGG GCAACGCGGC GCCGACGGTG
GCGATCGTCG TGGTCACGCT GGTGCTGACC TACTTCACAC TGGTGCTGGG TGAACTGGCG
CCCAAGCGGA TCGCGATGCG GCGGGCCGAG TCGTGGGCGC TGCTGGTGGC CCGGCCGCTG
GACATCGTGG CCGTGTTGGC GCGGCCCGCC GTGTGGCTGT TGGGGGTGTC GACCGACGCG
GTGGTGCGGC TGTTCGGCGT CGACCCCCGG GAGCAGAGCG AGGACGTGTC GCCGGAGGAG
ATCCGCGACC TGGTCGCGAC CCAGCGCGGC TTCACCCGGC AGCAGCGCGA GATCATCTCG
GGCGCCTTCG AGATCACCGA GCGGCTGGTT CGCGAGATCA TCGTGCCGCG CCGCGACGTC
ACCACGCTGG CCGCCGACAC CGCCACCGAC GCGGGCCTGC GGGCGCTGGT CGAGTCGGGA
CACTCGCGGG CGCCGGTGGT GGGGCCGGGC GGGCTCGACG ACGTCACCGG GATCGTCCAT
ATGCGAGATC TGGTCGACGC CTCGGGCACC GTCGCCGAGC ACTGCCGCGA CTTCATGACG
CTGCCGGAGA GCCTGCGGGT GTCCGATGCC CTGCGGCACC TGCGAAACGC GCACCAGGCC
TTCGCCGTCG TCGTGGACGA GTACGGGTCG GTCGACGGCA TCATCACGAT GGAGGACCTG
GTCGAGGAGA TCGTCGGCGA ACTCTACGAC GAGACCGACC GGGACGTCCT CGACATCACC
CGCGAGGCCG ACGGTGCGAT GCTGCTGCCG GGATCGTTTC CGCTGCACGA CCTTCCCGAT
CTCGACATCT ACATCGAACG GCCCGACGAC GGCGACTACA CCACCATCGC CGGGCTGCTT
TTGGCGCACC TGGGTCGCAT CCCCACCGAA CCCGGGGACA TCGTGGACAT CGACTCGCAC
ACCGCCGAGA TCACCGCCAT CGAGCAGCGG GCCATCACGC AGGTGCGGCT GCGTCTCAAG
CCGGAGGCCG CGGACAGGGA CCGCGATAAC TAG
 
Protein sequence
MSGYTSQLLL VLVLIVLNAV FAGSEMALVS LRDSQIQRLE RTSRGGRVLA KLARDPNRFL 
STIQIGITLA GFLASAAAAV TLAKPLVEPL GFLGNAAPTV AIVVVTLVLT YFTLVLGELA
PKRIAMRRAE SWALLVARPL DIVAVLARPA VWLLGVSTDA VVRLFGVDPR EQSEDVSPEE
IRDLVATQRG FTRQQREIIS GAFEITERLV REIIVPRRDV TTLAADTATD AGLRALVESG
HSRAPVVGPG GLDDVTGIVH MRDLVDASGT VAEHCRDFMT LPESLRVSDA LRHLRNAHQA
FAVVVDEYGS VDGIITMEDL VEEIVGELYD ETDRDVLDIT READGAMLLP GSFPLHDLPD
LDIYIERPDD GDYTTIAGLL LAHLGRIPTE PGDIVDIDSH TAEITAIEQR AITQVRLRLK
PEAADRDRDN