Gene Snas_5896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5896 
Symbol 
ID8887112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6255966 
End bp6256943 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514617 
Protein GI291303339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.102174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCAA TGGTTCGCCA TGTCCGCCCG GTGGCACCGC GATGGGCGCG CGGGGTCGTC 
GCCGACGTCT ACCGGCACGT CGGCTCCGAG TTCGCCGACA TCGGCCCGAC CGTCCGGATG
GCCTCGCCGA CGCCGGAGAT CCTGGCGCCG GGCTGGGCGC TGCTGTGGGA GTCGCGGCTG
GCGGGCGAAC TGCCGCTGCC GCACAAACTG CTCGCCGGAC TCGGTGTCGC GCAGGCCAAT
CGCTGCGGCC ACGACGAGGA CGACTGGCTG GCGGCCCTGC GCCGGGCCGG GGCCGGTGAA
CTGGCCGAAC AGGTCGCGGC TGGGGGACCA CCCGACGAGG CGCGGCTGAC GCGGCTGTTC
GACTGGGCCC GAGCCACCGC CTTCGACCCG TCGGCTCGAA TGCCGGTACG GCTGCGCCCG
AAACCGGCAC CGGAGCTCAT CGGAACCGTC CTGTTCGCAC ACTTCCGGGA CCGGATGTCG
CTGGCGATGC TGGCACCCGG ACTGAGCCCC GGCATTGAAG CCGCCGCGAG TGCTCCACTA
TGGCGCAACT CCCGTCCGGT GCTGCGCCCC GGCGACACCC TGACGCTGCT GAAACGCACC
GGCAAGACCC CGGACTGGGG AGCCGACTCG CCGGTCGGGA TCGCCTACGG CGCGCTGGCC
GCCAACGCCG CCCGGGGAGC GGGCATGATG TCCGCCGAAG CGGCCCACAC GGTCACCGAG
GTGATCGCCG CCTACCGGGG CCGGATCCAG CCCGACCCGT CGCTCATCTG CCTCGGCGAA
CTCAACCGGC TGTCCGAGGC CGACCGGTTC GCCGCGCGGG CCGCGATCCT GGCCGGACTG
GCCCCCGCCG AACTGACCGA CGCCGACGTC CTCGCCTGGC GGGCCACCGA CCGTCACCTC
AGCGACCACT GCACCGTGTT GCTGCTGGCC TACGGCGCGA TGACCGCCGT CGCGCACATC
GAGGCCGACA TCGCCTGA
 
Protein sequence
MSSMVRHVRP VAPRWARGVV ADVYRHVGSE FADIGPTVRM ASPTPEILAP GWALLWESRL 
AGELPLPHKL LAGLGVAQAN RCGHDEDDWL AALRRAGAGE LAEQVAAGGP PDEARLTRLF
DWARATAFDP SARMPVRLRP KPAPELIGTV LFAHFRDRMS LAMLAPGLSP GIEAAASAPL
WRNSRPVLRP GDTLTLLKRT GKTPDWGADS PVGIAYGALA ANAARGAGMM SAEAAHTVTE
VIAAYRGRIQ PDPSLICLGE LNRLSEADRF AARAAILAGL APAELTDADV LAWRATDRHL
SDHCTVLLLA YGAMTAVAHI EADIA