Gene Snas_5892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5892 
Symbol 
ID8887108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6251060 
End bp6252058 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003514613 
Protein GI291303335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.369057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCAC GACTGTCCGA TATCGCCCGG CACGCGGGGG TCAGCGAGGC CACCGTCTCC 
CGGGTGCTCA ACGACCGTCC CGGGGTCGGC TCCGCCACCA AGCAGGCGGT ACTGACCGCA
TTGGACGTTC TCGGGTATGA GCGCCCGGCC GCGCTGCGCC AGCACAGCGC CGGGCTGATC
GGACTTGTCG TACCGGAACT GGAGAACCCG ATCTTCCCGC TGTTCGCGCA GGTCATCAGC
ACCCAGCTGG CGAACAACGG CTACACCCCG GTCCTGTGCA CCCAAAGCCC CGGCGGCGTC
ACCGAGGACG AGTACGTCGA GATGCTGCGC GAGCGCCGGG TGGCGGGCAT CGTGTTCGTG
TCGGGGCTGC ACGCCGACAC CACCGCCGAC GTTGGCCGGT ACCAGAAACT CGCCGACGGC
GGGCTGCCGC TGGTCTTCGT CAACGGGTAC ATGGACCAGC TGCCGTCGCC GTGCTTCTCG
TGCGACGACG GCGTCGCGGC CAAGCTGGGC GTCGAGCACC TGCTGTCGCT GGGACACCGC
CGGATCGGGC TGGTCTCCGG ACCCGAACGC TTCATCCCGG TGCAGCGCAA GCGGGCCGGG
TACCTGGCGG CCATCGAGGG CCGGGCCGAA CCGCTGGTGG AGCTGACCAT GTTCGGCGTC
GAGGGCGGGG CCGCCGCGGC CGCCCGGCTG CTGGACTCGG GCGCCACCGG GATCCTGTGC
GGCTCGGATC TGATGGCGCT GGGCGCGATC CGCGAGGCCC GGGCCCGGGG ACTGTCGGTT
CCCGGGGACG TGTCGATCGT CGGCTACGAC GACTCGCCGC TGATCGCGCA CACCGACCCA
CCACTGACGA CACTGCGGCA ACCGGTGCGC CCCATGGCCT TGGCCGCGGT GCGCGCGCTG
CTGGACGAGA TCGCCGGACA CGCCGCACCG TCCACAGAGT ACCTTTTCCG CCCCGAACTG
GTCGTGCGCG CCTCCACCGG CACGGCCGTC ACCACATAG
 
Protein sequence
MRARLSDIAR HAGVSEATVS RVLNDRPGVG SATKQAVLTA LDVLGYERPA ALRQHSAGLI 
GLVVPELENP IFPLFAQVIS TQLANNGYTP VLCTQSPGGV TEDEYVEMLR ERRVAGIVFV
SGLHADTTAD VGRYQKLADG GLPLVFVNGY MDQLPSPCFS CDDGVAAKLG VEHLLSLGHR
RIGLVSGPER FIPVQRKRAG YLAAIEGRAE PLVELTMFGV EGGAAAAARL LDSGATGILC
GSDLMALGAI REARARGLSV PGDVSIVGYD DSPLIAHTDP PLTTLRQPVR PMALAAVRAL
LDEIAGHAAP STEYLFRPEL VVRASTGTAV TT