| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5890 |
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| Symbol | |
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| ID | 8887106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 6248168 |
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| End bp | 6249700 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003514611 |
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| Protein GI | 291303333 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.421958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCGA CCACCAGCCT GCCCGGGCTC GTCACCAAGA TCGCCGTCAT GTGCGTGGTG
GCGGGCCTGG GGGTGTGGGC GGCGCTGCCG CTGATCGGTG CCGGGGAATG GATCGGGCTC
GGCATCGTCG TCGCCGTCAC GGCGCTGCTG TTCTACCTGT ACCTGTCGCC CAGGCGGGTG
CCCGCCAAGT ACCTGGTGCC CGGAACGCTG CTGCTCATCG CGTTCCAGCT GCTGCCGGTC
ATCATCACGA TCTCCACCTC CACGACGAAC CTCGGCGACG GCCATCGCGG CACCAAGGAA
GAGGTCATCG ACTACCTGGA GGCGACCTCG GTCAAACAGC GCGAGGACGC GCCGACCTAC
GCGCTCACCG TCGCCTACGA CGGCTCCGGG GACCTGGTGT TCCTGTTGAC CGACGCGGAC
GGGAAGTTCT ACGCCGGAGA CGAGACCGGA CTCAAACCGC TCGCCGAATC CGATGTGGAG
GCGACCTCGA GCGGCAAGAT CCTCGAAGCC GAGGGCTACA CCCCGCTGAC CGGCGAGGAG
ATCGGTGAAC GCGACGCCGA GATCGCGAAG TTCGCCGTAC CCGTCGACGA CGGCGGCATC
CGCACCAAGG GACTCAACGA GGCCTACGAG GGCGTCGCGA CCCGAAAGTA CGAGGCCGAC
TGCGACTGCA TCGTCGACGC CAAGACCGGG CACCGCTGGA CCGCCGACGA CGCGGTCGGC
AGCTTCGTGG ACGACAAGGG CGAGAAACTG GCCCAGGGCT GGGAAGTCAA CGTCGGGGCG
TCCAACTTCA CCCGCGTCCT CACCGACGAC CGGCTGCGCG GCCCGTTCGT GTCGGTACTG
GTGTGGAACC TGATCTTCGC GGCCGGGACC GTGCTGCTCG TGTTCGTGCT GGGCCTGGCC
TGCGCCATGG CCCTCAACCA CGACCGGCTG CGGGGCCGCA AGATCTACCG CGCCATCGTG
ATCCTGCCCT ACGCCATGCC CGCCTTCGGG ATGCTGCTGG TGTGGCGGGA CATGTTCAAC
GCCGACTACG GGCTCATCAA CCAGCTGTCC GGTCTGGACA TCGCCTGGTT CGGGCACACC
GGTTCGGCGC GGCTGGCCGT GCTGCTGGTC AACCTGTGGC TCGGCTTCCC GTACATGTTC
CTGATCAGTA CCGGTGCGCT GCAAGCGATC CCGCGCGACA CCCTCGACGC GGCCAAGATC
GACGGCGCCT CGGCGCCGCA GGCGTTCCGC AAGGTGACGC TGCCGCTGCT GCTGGTGGCG
CTGACGCCGC TGTTGATCTC GTCGTTCGCG TTCAACTTCA ACAACTTCAA CGTCATCCAG
CTGACCACCG GCGGCGGCCC GTTCACCTCG GACTCCTCCA GCGCGGGCGG CACCGACCTG
CTCATCACCT ATACCTTCCG GCTGGCCTTC GGCGGTCAGG GTGCCGACTA CGGTTACGCG
GCCGCCATCA GCGCGTTCAT CTTCGTCATC GTCGCCGTGA TCTCGGCGGT GAGCTTCAGG
ACCACCCGGC GACAGGAAGA GGTGTACCGA TGA
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| Protein sequence | MNSTTSLPGL VTKIAVMCVV AGLGVWAALP LIGAGEWIGL GIVVAVTALL FYLYLSPRRV
PAKYLVPGTL LLIAFQLLPV IITISTSTTN LGDGHRGTKE EVIDYLEATS VKQREDAPTY
ALTVAYDGSG DLVFLLTDAD GKFYAGDETG LKPLAESDVE ATSSGKILEA EGYTPLTGEE
IGERDAEIAK FAVPVDDGGI RTKGLNEAYE GVATRKYEAD CDCIVDAKTG HRWTADDAVG
SFVDDKGEKL AQGWEVNVGA SNFTRVLTDD RLRGPFVSVL VWNLIFAAGT VLLVFVLGLA
CAMALNHDRL RGRKIYRAIV ILPYAMPAFG MLLVWRDMFN ADYGLINQLS GLDIAWFGHT
GSARLAVLLV NLWLGFPYMF LISTGALQAI PRDTLDAAKI DGASAPQAFR KVTLPLLLVA
LTPLLISSFA FNFNNFNVIQ LTTGGGPFTS DSSSAGGTDL LITYTFRLAF GGQGADYGYA
AAISAFIFVI VAVISAVSFR TTRRQEEVYR
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