Gene Snas_5888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5888 
Symbol 
ID8887104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6246530 
End bp6247255 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514609 
Protein GI291303331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.886605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAG TAGTTGGCGC GGGGCTACCG CGCACCGCCA CCTGGTCGCA ATCGGAAGCA 
CTTCCCGTCC TGCTTGGAGG GAAGTGTTAC CACATGCACC AGGTCATCGA ACACTTCGAC
CACGTCGACA CCTGGATCGA CGCCCTCAAT GGCAAGACCC CCGACTGGCA CAAGTTCTTC
GACGGCTACA CCGCCGCCGT GGACTGGCCC GCCTCCATCT TCTGGCCGGA GCTGGCGGAG
GCGTTCCCGG ACGCGCTGAT CCTGCTGTCG ACCCGCACCG ACGCCGCCAC CTGGTACCGC
AGCATGTCCA ACACCGTCCT GAAGTCGCTG GACATGTCCC GCAAGGCCGC CGAGGAAGGC
GTCGACCGTC CGGGATTCGA GGGTTCGCCG GAGAAGTTCC TCGAGATGAC CGACGCGCTG
TGGAAGCGGT TCGTCGGCGA GGACTCCGAC GTCACGGCCG ACGACGCCGA GGGCGCCCAG
CGCTGCTACG ACAGGTACAT CCAGCACGTC CGTGACACCG CGCCCGCCGA CCGGCTGCTG
GAGTGGAACG CCTCGGAGGG CTGGGAACCG CTGTGCGAGC GGCTGGGCCT GCCGGTGCCG
GAGCAGCCGT TCCCGCATTC GAACACGACC GCCGACTTCC AGAAGATGAT GGAAAGCGGT
CCTCCCGGCG CGGGCGCCGC CACCGCCGAG GAGTACCGGC AGCAGATGGC GCAGAAGGAT
CAGTAA
 
Protein sequence
MLKVVGAGLP RTATWSQSEA LPVLLGGKCY HMHQVIEHFD HVDTWIDALN GKTPDWHKFF 
DGYTAAVDWP ASIFWPELAE AFPDALILLS TRTDAATWYR SMSNTVLKSL DMSRKAAEEG
VDRPGFEGSP EKFLEMTDAL WKRFVGEDSD VTADDAEGAQ RCYDRYIQHV RDTAPADRLL
EWNASEGWEP LCERLGLPVP EQPFPHSNTT ADFQKMMESG PPGAGAATAE EYRQQMAQKD
Q