Gene Snas_5883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5883 
Symbol 
ID8887099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6242595 
End bp6243506 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514604 
Protein GI291303326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTGC CGAAACCGCC GCCGGGGCTG AAACCGTTGC TGCCCTTGGT GGTCGGCGCG 
GTGGTCGTGG CACTGCTCGC CGGAGTCGTG ATCGGACGGT TGCTGCCCGC CAGCGCCGGG
GCGCCCGTCG AGACGCAGGC GGAGTCCTCG GCCTCGGCCG ACGGCGGACA CACGCACGGC
GGCGGCTCCA CAGAGGAGTC CGAGCCCGCC GACCTGGAGG GGCTGTCGCT GTCGGCGTCC
GGATTCACGT TGGTGCCCAA GGACACCGAG GTGGGCCAAT CCGGCGAGGC GAAGCCGTGG
GCGTTCACCA TCACCGACGT CGAGGGCGAA CCCATCACGA AGTTCGCCAC CCTGCACGAC
AAGAAGATGC ACCTGTTCGC GGTGCGCCGC GACTTCACCG GGTACCAGCA TCTGCATCCG
GTCATGGATC CCGACTCCGG ACTGTGGAGC ACCGACATCA CCTTCGACAC GCCGGGCGGC
TGGCGGGTCA TCGCCGACTT CGCCGTCGGC GGCGGCAAGG ACGTCACGCC GGCCACGCTG
GGCACCGACG TGACCGTGCC CGGTGACTAC GAACCCGCCG CGCTGCCGGA ACCCAAGACC
ACGGCGAAGA CCGACAGCTT CGACGTCACG CTGGACTTCA AGCCCGAACT GGGCGCCAGC
GCCCCGGCGC TGATCGAGGT GACCAAGGAC GGGAAGGCCG CGGACCTGGA ACGGTACCTG
GGCGCACACG GGCACCTGGT TCTGTTGCGG CAGGACGACA TGGGCTTCGC GCACGTCCAC
CCCGACTCCA AGCGCGTCGA CGGCGAGCTG CGGTTCTGGG CCACCGTGCC GTCCAAGGGC
GACTACCGCG CCTTCCTGGA CTTCAAAGTG GACGGAAAGG TGCGCACCGC CGCGTTCACC
ATCACGGTGT GA
 
Protein sequence
MRLPKPPPGL KPLLPLVVGA VVVALLAGVV IGRLLPASAG APVETQAESS ASADGGHTHG 
GGSTEESEPA DLEGLSLSAS GFTLVPKDTE VGQSGEAKPW AFTITDVEGE PITKFATLHD
KKMHLFAVRR DFTGYQHLHP VMDPDSGLWS TDITFDTPGG WRVIADFAVG GGKDVTPATL
GTDVTVPGDY EPAALPEPKT TAKTDSFDVT LDFKPELGAS APALIEVTKD GKAADLERYL
GAHGHLVLLR QDDMGFAHVH PDSKRVDGEL RFWATVPSKG DYRAFLDFKV DGKVRTAAFT
ITV