Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5872 |
Symbol | |
ID | 8887088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6233275 |
End bp | 6234033 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Integral membrane protein TerC |
Protein accession | YP_003514594 |
Protein GI | 291303316 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000565064 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.519353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTGC TGACCAGTCC TGAAGTCTGG GTGTCGTTTT TCACGTTGCT CATACTCGAA CTGATCCTCG GAGTCGACAA CGTCGTCTTC ATTTCCATAT TGACCGGACG GCTTCCCGAG GAGCAGCGCC CCCGGGCCCG GTTCTGGGGG CTGCTCATGG CGCTCCTCAC CCGGCTCGCG CTGCTGGCGA CGCTGTCGTG GATGGTCGGC GCCACCGCGA ACCTGTTCAA GCTGTTCGGC ATGGGTTTCT CGTGGCGGGA CATCATTCTC ATCGTCGGCG GGTTGTTCCT GCTGGTGAAG TCGGTGCACG AGATCCACGT CCGGCTGGAG GGGCCGGAGC CCGAGCAGGG GGGCAACGGA GGCGGCGGCA AGACCGCCGG TTTCACCTCG GTGATCATCC AGATCGCGCT GCTGGACATC GTGTTCTCGC TGGACTCGGT CATCACCGCC GTGGGCATGG TCGACGAACT GGTCGTCATG GCCGCCGCCA TCGTCGTGGC CATCGCGCTG ACGCTGGTGT TCGCCAAACC GATCTGGGGC TTCATCGACC GGCACCCCAC CGTCAAGATG CTGGCCCTGT CGTTCCTGGT CCTCATCGGC GCGGCGCTGA TCGCCGACGG TTTCGAGCAG CACATCCCCA AGGGCTATGT GTACGGCCCG ATCGCGTTCT CGCTGCTGGT CGAGCTGCTG AACATCCGCG CGAAGAAGGC CGCCGCCAAA CCGGTCGAAC TGCGCGAGCC GCACGCCAAA GACCACTGA
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Protein sequence | MELLTSPEVW VSFFTLLILE LILGVDNVVF ISILTGRLPE EQRPRARFWG LLMALLTRLA LLATLSWMVG ATANLFKLFG MGFSWRDIIL IVGGLFLLVK SVHEIHVRLE GPEPEQGGNG GGGKTAGFTS VIIQIALLDI VFSLDSVITA VGMVDELVVM AAAIVVAIAL TLVFAKPIWG FIDRHPTVKM LALSFLVLIG AALIADGFEQ HIPKGYVYGP IAFSLLVELL NIRAKKAAAK PVELREPHAK DH
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