Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5871 |
Symbol | |
ID | 8887087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6231814 |
End bp | 6232923 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003514593 |
Protein GI | 291303315 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000185366 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.407546 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAACA CCGCCGACGC CCGTCCACTG TTCATCACCG GCGACGAACT CACCCGCGCC GCACTGCGCA AACTGGCCAC CGCCGCGGGC ACCGAAGCCC ACCACGCCCC CACCCCCGAC GCCGCCCGCC GCCACTGGAA CCGCGCCACC GTCGTGGTCA TCGCCGCCGA TCTCGCCCAG GCCTGCGCCG ACGCCCGACT GCCCCACCGC GGCGAGATCA TCCTGCTGAC CGGCCCCGAA CTGCCCTACG ACCAGGCATG GCCGCTGGCC CTGGCCATGG GTGCCACCCA GGTCGCCAGC CTCCCCGAAG CCGGGGCATG GCTGGCCCGC CAACTGGCCC CCGCCACCAC CCGACCCCAC CGGGCACCCG TCGCGACCAT CACCGGCGCC CGGGGCGGCG TCGGCGCCAG CACTCTCGCC GCCGGTCTGG CGATCGCCGC CGCCGACTCC GGCCGTACCA CCCTGCTCAT CGACGCCGAC CCCCGAGGCG GCGGCCTCGA CGTCCTGCTC GGCTGGGAGA ACCGCGACGG CCTGCGCTGG CCCGACCTCA CCGGCATGCC TGGCCCCTAC GACCCCGACC GGCTTCGCCC GAGCCTGCCC CACGACTCCC ACCTGGGCCT ACTCTCGTTC AGCCGCAACC GCTCCGTCCA CCTCGACCCC GCCACGGTCA CCGCCGTCCT CGACGCCGCC ACCCGTTCCC ACGACCTGGT CGTCATCGAC GCCCCCCGCT ACGGCGAGCC CTGGCTGCCC GACCTCATTT CCGGCAGCAC CCTGCTCGGT CTGGTCGTGC CCGCCGAAGT CCGCGCCATC GCCGCCGCCC GCCAGGCCAT CGCCGTCCAC GCCCCCCAGA CCGACCGAGC CCGCCTCATC CTCGCCACCA CCACACCCGC CCGTCTGTCC ACAACCGACA TAGTCAACGC CGTCGGTGTC CCCGTGGCCA CCGAAATCCG CCGCGACCCC CGCCTGGCCG CCGCGGCCGA AACCGGAGCC CTCCCCACCC GGGCCCGCCA CGGCACCCTC GTCACCGCCG CCAAGGCCCT CCTCACCGAA CTCCCCGACC CCCAACCCGA CGAACCCGCC ACCCCCCAAC TGGCCGGAGC CCCCTCATGA
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Protein sequence | MDNTADARPL FITGDELTRA ALRKLATAAG TEAHHAPTPD AARRHWNRAT VVVIAADLAQ ACADARLPHR GEIILLTGPE LPYDQAWPLA LAMGATQVAS LPEAGAWLAR QLAPATTRPH RAPVATITGA RGGVGASTLA AGLAIAAADS GRTTLLIDAD PRGGGLDVLL GWENRDGLRW PDLTGMPGPY DPDRLRPSLP HDSHLGLLSF SRNRSVHLDP ATVTAVLDAA TRSHDLVVID APRYGEPWLP DLISGSTLLG LVVPAEVRAI AAARQAIAVH APQTDRARLI LATTTPARLS TTDIVNAVGV PVATEIRRDP RLAAAAETGA LPTRARHGTL VTAAKALLTE LPDPQPDEPA TPQLAGAPS
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