Gene Snas_5860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5860 
Symbol 
ID8887076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6224378 
End bp6224812 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_003514582 
Protein GI291303304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.344345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCTGC GTTTCGAGTA TGAGGTCAAG GCTGTGCCCA CCGGTCGTGT CAAGTGGTAC 
AACGCCGAAA AGGGATTCGG CTTCGTCTCC CGGGACGACG GCGGCAACGA TGTGTTCCTG
CATCGCGACG CTCTCCCCGA GGGCGTCACC GAACTGAAGG CCGGTCAGAA GCTCGAATAC
GGCATCGTGG ACACCCGCCG GGGTGTGCAG GCGATGTCGG TAACCCTTGT AGACACTCCC
AAGCGGGTGG CCAAGGCCGA ACCCCAGACC CCGAAGCGCT CCCCCGAAGA GGTACACGGC
CTCATCGAGG ACATGATCAA GGTCCTCGAG GACCAGGTCA TGCCGACGCT GCGTCGCGGT
CGTCACCCCG ACCGCAAGCA CACCGCGAAG ATCGCCGAGG TCGTCCACGC AGTGGCGCGC
GAACTGGAAG GCTGA
 
Protein sequence
MFLRFEYEVK AVPTGRVKWY NAEKGFGFVS RDDGGNDVFL HRDALPEGVT ELKAGQKLEY 
GIVDTRRGVQ AMSVTLVDTP KRVAKAEPQT PKRSPEEVHG LIEDMIKVLE DQVMPTLRRG
RHPDRKHTAK IAEVVHAVAR ELEG