Gene Snas_5858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5858 
Symbol 
ID8887074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6221877 
End bp6222671 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514580 
Protein GI291303302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.912985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGG CCTTCTCCCC CTGCCCCAAC GACACCTTCA TCTTCCACGC CTGGGTGCAC 
GGCCTGGTGG AGGGCGCCCC GGTCCCCGAG GTCACCTACG CCGATGTGGA CGTCACCAAC
ACCCGGGCGC TGACGGGCGA GTTCGACGTG GTCAAGGTCT CGTTCGCGGC GCTGCCGTGG
CTGCGCGACG GCTACGAGCT GCTGCCGTGC GGCGGCGCGC TCGGCCGGGG CTGCGGGCCG
CTGGTGCTGA CCCGCCAGCC GTCGAGCCCC GAGAAGCTCG CGGGCGCGAC CGTCGCCGTC
CCCGGTGAAC GCACCACCGC CTACCTGCTG TTCCGGTTGT GGTCGCAGGG TTTCGCGCCC
GCGAACATCC GGGTGGTCCC GTTCGCCGAG ATCATGCCCG GCGTCGCGTC CGGCCGTTTC
GACGCGGGCC TGGTCATCCA TGAGGCCCGG TTCACGTACC AGGACCACGG TCTGTCCATG
CTGGAGGATC TCGGGGACTG GTGGGAGCGC GAGACCGGAC ACCCGATCCC GCTGGGCGCC
ATCCTGGCCC GCAAGGGCCT GGACACCGAC GCGATAGCGG GCTGGATCCG CGCCAGCCTC
GCCCACGCCT GGGCCAACCC GCTCGACAGC GCCGCCTACG TCGCCGAGCA CGCCCAAGAG
CTGTCGGCGG ACGTCACCCG GCAGCACATC GAGCTGTACG TCAACGAGTT CAGCGCCGAC
CTCGGCGAGG CGGGGCGAGC CGCCGTCGAG ACCCTGCTGG GGCGGGCCGC GTCGGCCGGG
CTGGTGCCCG GCTGA
 
Protein sequence
MKLAFSPCPN DTFIFHAWVH GLVEGAPVPE VTYADVDVTN TRALTGEFDV VKVSFAALPW 
LRDGYELLPC GGALGRGCGP LVLTRQPSSP EKLAGATVAV PGERTTAYLL FRLWSQGFAP
ANIRVVPFAE IMPGVASGRF DAGLVIHEAR FTYQDHGLSM LEDLGDWWER ETGHPIPLGA
ILARKGLDTD AIAGWIRASL AHAWANPLDS AAYVAEHAQE LSADVTRQHI ELYVNEFSAD
LGEAGRAAVE TLLGRAASAG LVPG