Gene Snas_5856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5856 
Symbol 
ID8887072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6219766 
End bp6221244 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514578 
Protein GI291303300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATG CGTCGACGCT ACTGGTTTTC GACACGGGCC CCGTGACGGC CATGCGCGAC 
TGTGACGGCA CCTGTTGGCC CCGCGCGGTC ACCGCGTCGT ATCCTTGCCG GGTGTCACAG
ATTCCCACCA TGTCCAGGCC CGCGCGCCTA GACCGACTGT GTGCCGAGGC CGTCGAACTC
GCCCGGGCCG CGGCCGAAGA GACCGGCGAG GGGGTCGGCG AGTACCTGCA CGCCGAACCC
GAGGCCGAAC GGGTGGTGAC GCATTTCTTC GAGACCACAC TCGCGGGTTA CCGGGGCTGG
CGCTGGGCGG TGGTCGTGGC GCGGGCACCG CGTTCGCGCA CCGTCACCGT CAACGAGACC
GCGCTGCTGC CCGGCCCGGA CGCCCTGAAG AGCCCGGAAT GGGTGCCGTG GGCCGAACGG
CTGCGCGCCG GGGACGTCGG GGTCGGCGAC CTGCTGCCCA CCGACGAATC CGACGCCCGG
CTCACCCCCG CGTACACCTA CAGCGATGAC GACGCCGTCG AGGACATCGC CTTCGAGCTC
GGCGTCGGCC GGGCCCGGGT CATGAGCCGC GAGGGCCGCA TCGACTGCGC CGAGCGCTGG
TACGAGGGCG ACCACGGCCC GAGCGCCGAG ATCTCGGTGT CGGCCCCGCC CGAGGCGCGG
TGCGGCAGCT GCGGTTTCTA TCTGCCGCTG GCGGGTTCGC TGCGGCAGGT GTTCGGGGTC
TGCGGCAACA TGTACGCCTC CGACGACGCC ACCGTCGTGT CCTCCGACCA CGGTTGCGGC
GCACACTCCG AAGTGCTCAC TCAGATCGAC GCGACCGGCC CGCGGGACGT CGAGCTGACC
GACACCGCCT ACGACGACGC GCTCATCGAA CAGGTCGACA CGACCGCCGA CGACGAGGAG
CCGGAAGCGC CGGTCGCCGA GGTCGAGGAA GCCGACGAGG CTGACGAAGC GGACGCGACC
GCCGAGGTCG AAGCCGAGAC CGAGACAGCT GAAGTCGAAG TCGAAGTCAC GGAGACGGCC
GAGGCCGAAC CGGAGACGAC GGTGACCGAG CCCGCCCCGG AACCGACGGC CGTCGAGGTC
GCCGAGGCCC CGGCCGACAC GCCGGAGACC ACGGAAATCG ATGCCGTCGA AGCACCGGCG
GTCGAGGCAC CGCAGCCGGT CGAGACCGAG CCCGTAGCCG AGGCCCAACC GGCAGCCGAG
CCCGTGGCCG AAGCTGAGCC CGAAGTCGCG GTCGTCGAGC CGATGACCGA GGCCGACCAG
GTCGCCGACA CGCCCGAGGG CGGCGTCACC GAACCGATCG CCGAACCGCT CGCCGTCACC
GAGGTCGCGG CCCCGGCCGA CGTCGAGACA CCGGCGGAGG CCGAGGTCAC CGAGGCCGAG
CAGCCACAGG CCACTCAGGA CGATTCAGGG AAGGACGAGG AACCGAACGA CGCTAGTCCC
GCTGGCGACG TTTCTGGTTC CGATCGTGAA GCACCATGA
 
Protein sequence
MNDASTLLVF DTGPVTAMRD CDGTCWPRAV TASYPCRVSQ IPTMSRPARL DRLCAEAVEL 
ARAAAEETGE GVGEYLHAEP EAERVVTHFF ETTLAGYRGW RWAVVVARAP RSRTVTVNET
ALLPGPDALK SPEWVPWAER LRAGDVGVGD LLPTDESDAR LTPAYTYSDD DAVEDIAFEL
GVGRARVMSR EGRIDCAERW YEGDHGPSAE ISVSAPPEAR CGSCGFYLPL AGSLRQVFGV
CGNMYASDDA TVVSSDHGCG AHSEVLTQID ATGPRDVELT DTAYDDALIE QVDTTADDEE
PEAPVAEVEE ADEADEADAT AEVEAETETA EVEVEVTETA EAEPETTVTE PAPEPTAVEV
AEAPADTPET TEIDAVEAPA VEAPQPVETE PVAEAQPAAE PVAEAEPEVA VVEPMTEADQ
VADTPEGGVT EPIAEPLAVT EVAAPADVET PAEAEVTEAE QPQATQDDSG KDEEPNDASP
AGDVSGSDRE AP