Gene Snas_5836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5836 
Symbol 
ID8887052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6200940 
End bp6202718 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content68% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003514559 
Protein GI291303281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCCC CTGTCAGACG TGCCCTCATC GCCGCCATAG GCGCGGGCGC GATCGCGATC 
CCGGTAACCA TCGCCGGTGT CGCCGTCGCG GCCCAGGCAA CGACCATCGC CGAAATCCAA
GGCGCCGCCC ATGTTTCCCC CGTCGCGGGC GAGGAGGTCA CGGACATTCC CGGCACCGTG
ACCGCCGTGT CCGAGAAGGG CTTCTGGATG CAGAGCGCCG AGCCCGACTC CGACGAGGCC
ACCAGTGACG GCATCTACGT CTTCACCAAC GCGGCCCCCG AGGCCAAGGT CGGCGACGCG
GTGAAGGTGG CGGGCAAGGT CACCGAGTAC CGGCCCGGCA AGGCCGAGAA CAACCTGTCC
ACCACCGAGA TCACCGAGCC CAAGGTGAGC GTCGAGGGTT CGGGCGGCGA GGCCCCGGAG
GCGACCCTGG TCGGCCCCGA CGGTCGCGTC GCGCCCGAGA AGGTCCACTC GGCCGAGCCC
GGCGACGTGG AGAAGGCCGA CTTCGACGTC AAGGCCAACG CCCTGGACTT CTACGAGTCC
ATGGAGGGGA TGCTGGTGCG GGTCAAGGAC TCCGTCGCCG TCGGTCCCAC CACCAAGAAC
GGTGAGGTCT CGGTGCTGCC GGGCGGCGAG GGCGGCCTGC GCACCGAGCG CGGTGGCGTC
AAGTTCACCG GCGAGGACGC CAACACCGAG CGGGTCGTCC TGGACGACCT GGTCTCCGAG
GCCCCGGTCG CCAACGTCGG CGACAAGCTG CCCGACGACG TCGACGGCGT CCTGGACTAC
AGCTTCGGCA ACTTCAAGCT CAACGCCCTG GAGACCCCGA AGGTGGAAAG CGCCGGGTTG
AAGCCGGAGA CCACCGAGGC GCAGGGCGAC AAGCTCGCCA TGGCCACCTA CAACGTGGAG
AACCTGGACC CCAAGGACGA CCAGGCCGCC TTCGACCGGC ACGGCGAGTA CATCGCCAAG
AACCTGGCCT CCCCGGACAT CCTCGGCATC GAGGAGATCC AGGACAACAA CGGCGCCGAC
GACGACGGCA CCGTTGCCGC CGACGAGACC TGGAAGAAGC TCATCGAGGC CATCAAGGCC
GCCGGTGGAC CGTCCTATGA GTACCAGTCG ATCGACCCGG AGAACAACGC CGACGGCGGC
GAGCCGGGCG GCAACATCCG CACCGGGTTC CTGTACAACC CCGAGCGGGT CAAGCCCTCC
GGCAAGGACG CCGGTGACGC CACCACTCCG GTCGAAGTCT CCGCGGAGGG ACTGAGCGTG
TCCCCGGGCC GCGTCGCCCC GGCCGACGAC GCCTGGAAGG ACTCCCGCAA ACCGGTCGCG
GCCGAGTTCG AGTTCAACGG CAAGAAGGTC TTCGCCGTGG TGAACCACTT CGCGTCCAAG
GGCGGCGACG ACCCGCTCAT GGGCCGGTTC CAGCCGCCGG CCCGCTCCAG CGAGGAGCAG
CGGCACCCGC AGGCCGAGCT GGTCAACAAG TTCGTCAAGG AACTGCAGGG CGCCGTCCCG
GACGCCAACG TCGTCGTCCT GGGCGACATC AACGACTTCG AGTTCTCCGA GACCGTCGCC
AAGCTGACCG CCGGTGACGC CCTCAAGGGT GCCTACGACC TGCTGGACGA GAAGGAGCGC
TACAGCTACG TCTTCGACGG CAATTCGCAG GTGCTGGACC AGATCCTGGT CTCGCCGAAG
CTGGCCGAGG CCGCCGAACT GGACGTCGTG CACGTGAACT CCGAGTTCAC CGACCAGGCC
AGTGACCACG ACCCGAGCGT GGTCAAGTTG ACGCTGTAA
 
Protein sequence
MRPPVRRALI AAIGAGAIAI PVTIAGVAVA AQATTIAEIQ GAAHVSPVAG EEVTDIPGTV 
TAVSEKGFWM QSAEPDSDEA TSDGIYVFTN AAPEAKVGDA VKVAGKVTEY RPGKAENNLS
TTEITEPKVS VEGSGGEAPE ATLVGPDGRV APEKVHSAEP GDVEKADFDV KANALDFYES
MEGMLVRVKD SVAVGPTTKN GEVSVLPGGE GGLRTERGGV KFTGEDANTE RVVLDDLVSE
APVANVGDKL PDDVDGVLDY SFGNFKLNAL ETPKVESAGL KPETTEAQGD KLAMATYNVE
NLDPKDDQAA FDRHGEYIAK NLASPDILGI EEIQDNNGAD DDGTVAADET WKKLIEAIKA
AGGPSYEYQS IDPENNADGG EPGGNIRTGF LYNPERVKPS GKDAGDATTP VEVSAEGLSV
SPGRVAPADD AWKDSRKPVA AEFEFNGKKV FAVVNHFASK GGDDPLMGRF QPPARSSEEQ
RHPQAELVNK FVKELQGAVP DANVVVLGDI NDFEFSETVA KLTAGDALKG AYDLLDEKER
YSYVFDGNSQ VLDQILVSPK LAEAAELDVV HVNSEFTDQA SDHDPSVVKL TL