Gene Snas_5833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5833 
Symbol 
ID8887049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6198307 
End bp6198843 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514556 
Protein GI291303278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCATT ATGGCACCAT GGATTTGACA ACATATGTGG AGAGCGCCCA AAGGCAACTG 
GCGGTGCTCG CCGACCCTGA GGGAGACAAC CAGGCGGTCG CCGAGCGCAT GGCCTCGGCA
CTGGCACCGA CGATCCGGCT GATGCTGCTG GAAGCGCTGT CCGAAGCCAC CGAGGACATC
ACTCTTGAGC TGGCACCGGG TTCGGTCGAA GTCCGGCTGC GCGGCGGCGA GCCGTCGTTC
GCGGTCACGT CACCGCTGGC CGCCGAACCC GCCGCGCCGG ACACCGAACC GATGGAGCCA
GACGGCGCCA ACGTGGTGCC ATCGGACATC GACGACGGCC CGATGACCCG CATCAACCTG
CGGCTGTCGG AGCAGTTCAA GGGCCGCGTC GAAGAGGCCG CCGAAGCCGA GGGCCGATCC
GTCAACGCCT GGCTGGTGCG GGCGGCGGCG ATCGTCCTGG AATCGCGCGG TCGCGGTTCC
GCCGCGCGCA ACGTCACCAC CGTCGGAAAA CAGCGCTACA CCGGATGGGT GCGCTAG
 
Protein sequence
MCHYGTMDLT TYVESAQRQL AVLADPEGDN QAVAERMASA LAPTIRLMLL EALSEATEDI 
TLELAPGSVE VRLRGGEPSF AVTSPLAAEP AAPDTEPMEP DGANVVPSDI DDGPMTRINL
RLSEQFKGRV EEAAEAEGRS VNAWLVRAAA IVLESRGRGS AARNVTTVGK QRYTGWVR