Gene Snas_5832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5832 
Symbol 
ID8887048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6197581 
End bp6198270 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514555 
Protein GI291303277 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACGT TCGAAACCCC GAAACCGGTC AACGTCGAGA TCACCGTGAT GCTCGGCAAC 
GTGACCGTCA CCGCCGAGGA CCGCACCGAC ACGACGGTCA CCGTGACCCC CACCAACCCC
GACAACGAAG CCGACGTCAA AGCCGCGAGC GAGACCCACG TGGAACTGTC CGGCGACACC
GTCACCATCA AGGGCCTGAA GTTCCGCAAA TACATCGGCC CGACCAAGAA CAACCTGTCG
GTCGACATCT CGGTCGCGGT GCCCACCGGG TCGAGCCTGT TCGCGAAGGC GTACGGATCC
GTGCTCAACC TGACCACCAG CGGACGGCTC GACAGGTGCG AGTTCCGCAC CGGAGCGGGC
CGCCTCGTCC TGGACCACGT CGGACCGATG CGACTGCGCA CCGACGGCAA CATCGTGATC
GACCGCGCCG ACGGGGACGT GGACGCGACC ACCTCGACCG GCAACATCCG CATCAGCGAG
GTAAAACAGG GCACAGTAGA ACTCAAGACC TCGTTCGGCG AGATCGAGGT CGGCGTCCCC
GAGGGCACCG CCGCGCTGCT CGACCTCCAG ACGAGCCTCG GCAGCATCCG CAACCACCTG
ACCGACACCA GCGAACCCGC ACCCGACGAC CGCACCGTCA AGGTCCGAGC CCGCACCTCC
GGCGGCGACA TCGAGATCCG CCGATCCTGA
 
Protein sequence
MPTFETPKPV NVEITVMLGN VTVTAEDRTD TTVTVTPTNP DNEADVKAAS ETHVELSGDT 
VTIKGLKFRK YIGPTKNNLS VDISVAVPTG SSLFAKAYGS VLNLTTSGRL DRCEFRTGAG
RLVLDHVGPM RLRTDGNIVI DRADGDVDAT TSTGNIRISE VKQGTVELKT SFGEIEVGVP
EGTAALLDLQ TSLGSIRNHL TDTSEPAPDD RTVKVRARTS GGDIEIRRS