Gene Snas_5786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5786 
Symbol 
ID8887002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6149461 
End bp6150270 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content71% 
IMG OID 
ProductAbortive infection protein 
Protein accessionYP_003514509 
Protein GI291303231 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.755126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA TTGCCGCTGT AGAGAATCAG CCCCGACTGC GACCGGGCTG GCGGATACCG 
CTGACCGTCG TGGGCATGTT CGCCTTCGTC GGCGCCGGAA TCGCGACCTC CGCGTTGCTG
TCGCTGCTGC CGGTTCCCGG GCCCGCGGTG CGGATCGCGA CCCTGACCGC GATGGCCGCC
GCCGCGATCG GCGTCGTGTA CTGCCTGCGC CGCTTCGTGG ACCGGCGGCC GTGGCGCGAC
CTCGGACTGA CCTGGCGCCC CGCCGACGTG CTGCCGCTGC TCTTGGGCGG GGCACTGGCG
GCGCTGGTCG TGCTCACCGC GCACCTCGGC GCCATCGCCC TGGGACTGAG CGACTGGCGC
CCCACCTTCG AAGACGGCCT GCCGCTGATA CCGGGCCTGC TGCTGGGATA CCTGATGATC
CTGCTGGGCC AGGCCTTCCC CGAGGAACTG CTGTGGCGCG GCTACCTGCT GACCTCGCTG
TCGGCGGACT GGCGACGCTG GGCGGCCGTC GGCGCCACCG CGCTGGGATT CGGTGCCATG
CACGTGATCT CGAACCCCGG CACCGACGCG TCGCTCGGCT GGCGGCTGCT GTACGCCGTG
ATGGCCTGCG GCCTGGGCTT CGCCGCCGCC AGCTGCCGCC TTCGTGGCGG GACGATATGG
CTGGCGGTGG GCTTCCACGC GGGCCACAAC CTCACCGGAA AGGTCCTCAA CACCGGCGCC
TACGACTGGT CGCTGCTGGT GTCGTTCGCG GTCTTCCTCG GTTTCGGCCT CGTCATGCTG
CGCACGGCCC CGCGCCGGTC ACCGGGTTAG
 
Protein sequence
METIAAVENQ PRLRPGWRIP LTVVGMFAFV GAGIATSALL SLLPVPGPAV RIATLTAMAA 
AAIGVVYCLR RFVDRRPWRD LGLTWRPADV LPLLLGGALA ALVVLTAHLG AIALGLSDWR
PTFEDGLPLI PGLLLGYLMI LLGQAFPEEL LWRGYLLTSL SADWRRWAAV GATALGFGAM
HVISNPGTDA SLGWRLLYAV MACGLGFAAA SCRLRGGTIW LAVGFHAGHN LTGKVLNTGA
YDWSLLVSFA VFLGFGLVML RTAPRRSPG