Gene Snas_5785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5785 
Symbol 
ID8887001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6148267 
End bp6149472 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content69% 
IMG OID 
Productpeptidase S8 and S53 subtilisin kexin sedolisin 
Protein accessionYP_003514508 
Protein GI291303230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.464065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGCGG CACGGCGCAG TCCACTTCGG CATGTCATCG ACGACTGGCG CGGGGCACCG 
GCGTTCGTCG GGGGCCTGGC CACGGTCGTG GCGACCACGG CTCTGGTCGT GTTCGGTGGG
TCGCACGCGC AGGGTCAGGT GCTGGCCGAC GACGCTCCCG GGGCGATCAA GGACCGGTAC
ATCGTGAAGT CCGACGCCGA TCCGAGCGCG CTGGCCGAGG AGTACCACGG CAAGGTCCGC
AGGACCTTCG CCGCCTACGG CGGGTTCAGC GTGACCATGG ACGAGGCCGA CGCCCGGGAA
ATGGCCGCCG ATCCTGAGGT CGAGTACGTC AACCAGGTGA CCACCACGAC CGGCCTGGGC
GACTCGGTGC AGTCGCGGCC GCCGTCGTGG AGCCTGGACC GGATCGACCA GCGCACTCCC
GCCCGCGACG GGTCGTTCCG CTATCCCGAC TCGGCGGGCC GGGGCGTGAC CGCGTACGTC
ATCGACAGTG GACTCAAGTT GGACCTGCGT GAGTTCTCCG GGCGGGCGAC CACGGGTATC
GATGTCATCG ACGGCGGCAA GGCCTTGGAC CGCAACGGTC ACGGCACCTC GGTCGCGGTG
ACGCTGGGCG GACAGAACTT CGGGGTGGCC AAGAACGTGA AGCTCGTCGC GGTGCGGGTG
CTGGACGAGG ACTGGCGCGG CACCAACGAG GGCATCGTGG AGGGGCTGAA CTGGATCGCC
GAGCACGCGA AGGGCCCGTC GGTGGCGAAC ATGAGCCACA GTCGCGCCTA TGACCGCGCC
ATCAACGACG CCGTCGGCGC GGTCGTGGAC GCTGGCGTGA CGACGGCGGT CTCGGCGGGC
AACAACTCCT ACAACGCCTG CCGCAAGTCG CCGCCGTCCG AGCCGTCGGT CATCGTCGCG
GGGGCCACCC GCCGCGACGA CAGGAAGGCC AGTTTCTCCA ACTTCGGGTC GTGTGTGGAC
ATATTCGCTC CGGGCGTGGC CGTCGGCACC AAGAACCGGC TCGGTCAGTC GATCAAGAGC
TCGGGCACCT CGTTCGCGGC TCCGCACGTC GCCGGGGCGG CGGCGCTCTA CCTCGCCGAA
CATCCCCGGG CGACGCCGAA GCAGGTTCGG GCGGCGCTCA TGGACCACGC GCTGTCCAAG
GTCGTCACCG ACCGGGGAAA GTACAGTCCC GACCGGATGC TCAACATCGA CTTCCTAACC
CGGTGA
 
Protein sequence
MCAARRSPLR HVIDDWRGAP AFVGGLATVV ATTALVVFGG SHAQGQVLAD DAPGAIKDRY 
IVKSDADPSA LAEEYHGKVR RTFAAYGGFS VTMDEADARE MAADPEVEYV NQVTTTTGLG
DSVQSRPPSW SLDRIDQRTP ARDGSFRYPD SAGRGVTAYV IDSGLKLDLR EFSGRATTGI
DVIDGGKALD RNGHGTSVAV TLGGQNFGVA KNVKLVAVRV LDEDWRGTNE GIVEGLNWIA
EHAKGPSVAN MSHSRAYDRA INDAVGAVVD AGVTTAVSAG NNSYNACRKS PPSEPSVIVA
GATRRDDRKA SFSNFGSCVD IFAPGVAVGT KNRLGQSIKS SGTSFAAPHV AGAAALYLAE
HPRATPKQVR AALMDHALSK VVTDRGKYSP DRMLNIDFLT R