Gene Snas_5783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5783 
Symbol 
ID8886999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6144925 
End bp6145689 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID 
Productnuclear export factor GLE1 
Protein accessionYP_003514506 
Protein GI291303228 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAG GTATATCCAT GAATCCCATG GTTCGCCGGG CGGCGACCAT CCTCGCGGCC 
TCGGCGCTGG GGGTGCTGGC TTTCGCCGCA CCCGCCTCGG CCCACGTCAC CATCGCCCCC
GTCGAGGCCG AGGCCGGAAG CTACGCCCGC CTCGACTTCC GGGTACCCAA CGAGTCCGAC
GAGGCCAGCA CCATCGAGGT CGAGGTCAAC CTGCCGAAGG AGACCCCGCT GGCCTCGGTG
CGGACCAAGA AGATCGACGG CTGGAAGGTC GAGACCAAGA CCCGCAAGCT CGACAAGCCC
ATCGACCTGC ACGGCCGCAA GGTGAAGGAG GCCATCGGCA CCATCATCTG GACCGCCGAC
AGCGACAAGA CCGGCATCCA GCCCGGCGAG TTCGGGGAGT TCCCGATCAC CGCGGGCCCG
CTGCCCGACA AGGGGACGCT GGTCTTCAAG ACCATCCAGA CGTACTCCGA CAAGTCGAAG
TCGGAGTGGA TCGACGAGCC CAACGAGGAC GGCTCCGAGC CCGAGGAACC GGCCCCGACC
CTCAAGATCA CCCCCGCCAA GGGCGGCGGT CACCACGGCG GCACCACCAC CGGGGATGAC
GACGACGCGG ACGACGCCGA CGACCACGCC GACGACGAGG ACGAGGCGGC CGGTTCGGGG
ACCACGATCC TGGCGGCGGT CGGCACCGGC CTGGCCGCGA TCGCGCTGGT CGTGGCGGTG
CTGGCCTTCC TGGCCCGGCA GCGCGGCTCG GCGGCCAAGC CCTAG
 
Protein sequence
MMKGISMNPM VRRAATILAA SALGVLAFAA PASAHVTIAP VEAEAGSYAR LDFRVPNESD 
EASTIEVEVN LPKETPLASV RTKKIDGWKV ETKTRKLDKP IDLHGRKVKE AIGTIIWTAD
SDKTGIQPGE FGEFPITAGP LPDKGTLVFK TIQTYSDKSK SEWIDEPNED GSEPEEPAPT
LKITPAKGGG HHGGTTTGDD DDADDADDHA DDEDEAAGSG TTILAAVGTG LAAIALVVAV
LAFLARQRGS AAKP