Gene Snas_5738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5738 
Symbol 
ID8886954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6100578 
End bp6101420 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514461 
Protein GI291303183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAT CCGATGGGGC GACACCCAAC GAGGGCTATC AACCCCCCTC TGAATTCGAC 
ATCAATGAAC CGACGATCGC GCGCGTGTAC GACGCGCTGC TGGGAGGCAA GGACAACTTC
GCCGCCGACC GCGCGGGCGC CGACACCTAC CTCAAGTACG TGCCCGATTC GGGCAAGTGC
GCCAAGGAGA ACCGGGAAGC ACTGGTCAAG GGGGTGCAGT ACCTGGTCCG CCAGGGCATC
GACCAGTTCC TGGACATCGG CAGTGGCCTG CCGACGGTGA AGAACACCCA CGAGGCCGCC
CAGGAGATCA ACCCGGAGGC GAAGGTCGTC TATGTGGACA ACGACCCGAT CGTGCTGGCG
CACGGCCGGG CGCTGCTGGC GACCAACAAC TCGACCACTG TGGTCACCGC GGACCTGCGG
CGCCCGAACG AGATCCTCGA GAACGAGGAC GTGCAGCGGA TGCTCGACTT CAGCCGTCCG
ATCGCGCTGA TGATCGTGGG CCTCCACATG CACTTCCACG ATGACGAGCA GCCCGACGAG
TGGGTGCGCA CCATCCTGGA CACGATGCCC GCCGGAAGCT ACCTGTTCAT CACCGACTTC
GTCGACACCG GGGAACCGCT GCAGAAGGCG ATGGAGCAGG CCGGTCTGGA AAGCCTTGGC
AACGGCTGGA TCCGGACCCC CGAGCGCATC AAGGAGCACT TCCTCGGTCT GCCGCTGGAA
CCGCCGGGAC TGGACTTCCT GGCCCGCTGG TTCCCGGGGG AGCCGGACCG GGTGCTGACT
CCGGCCGAGG ACCTGGAGCC GTACCAGCGG ATCCTCATGG CGGGAATCGC CAAGAAGGGC
TAA
 
Protein sequence
MTASDGATPN EGYQPPSEFD INEPTIARVY DALLGGKDNF AADRAGADTY LKYVPDSGKC 
AKENREALVK GVQYLVRQGI DQFLDIGSGL PTVKNTHEAA QEINPEAKVV YVDNDPIVLA
HGRALLATNN STTVVTADLR RPNEILENED VQRMLDFSRP IALMIVGLHM HFHDDEQPDE
WVRTILDTMP AGSYLFITDF VDTGEPLQKA MEQAGLESLG NGWIRTPERI KEHFLGLPLE
PPGLDFLARW FPGEPDRVLT PAEDLEPYQR ILMAGIAKKG