Gene Snas_5737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5737 
Symbol 
ID8886953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6099688 
End bp6100518 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content64% 
IMG OID 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_003514460 
Protein GI291303182 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.598241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGG GCGCTCACCT GCGCAGACTC CGTGAGGCGG AAGGCATCAG CCGTTCGGAC 
GCGGGCTGGG AGATCCGGGC CTCCGACTCC AAGATCAGCA GGCTCGAACT CGGCCGGGTC
AGTTTCAAGA TCCGTGACGT CGAGGATCTG CTGACGTTCT ACGGAGTCGA CGACGAAGAG
GAACGCGCCG AACTCCTGAA ACTGGCCGAG GAGGCCAACA CTCCCGGTTG GTGGCACCGT
TTCGGTGACG TGCTTCCGGG CTGGTTCCAG TCCTATCTGG GCCTTGAGGC CACGGCCTCC
CTCATCCGGA CCTATGAGAA CCAGTTCATC CCAGGACTGT TGCAGACCAA GGCTTACGCG
CGTGGCGTCG TGTTGCTGGG TCACGGACGC GCCAGTGCCC GCGAGGTCGA TCACCGAGTG
GATCTGCGGA CGTCGCGACA GCAGATCCTG CACCGCGAGA ACCCGCCTCG GGTGTGGACG
GTCGTCGACG AGGCGGCACT GCGACGGCCG ATCGGTGGCA AGCAGGTGAT GCGGGAGCAG
CTGGAACACC TGATAGAGGT CAGCAAGGCT CCCCACATAC AGATCCAGAT CATCAAGTTC
GAGGCCGGTG GCCACGCCGC CGCGGGCGGC CCGTTCACGA TGCTGCGGTT CCCGGACCAG
GAACTGCCCG ACATCATCTA CATCGAACAG CTCACCAGCG CCCTGTACCT GGACAAGCGG
GACGACGTGG ATCTGTACAC CGCGTCGATG GAACGGCTGT GCGTGCAGGC GGAAGAGCCG
AAGAAGACGC CGGAGATACT CCGGGAGATC ATCGGGCAGC TCTACTCGTA G
 
Protein sequence
MLLGAHLRRL REAEGISRSD AGWEIRASDS KISRLELGRV SFKIRDVEDL LTFYGVDDEE 
ERAELLKLAE EANTPGWWHR FGDVLPGWFQ SYLGLEATAS LIRTYENQFI PGLLQTKAYA
RGVVLLGHGR ASAREVDHRV DLRTSRQQIL HRENPPRVWT VVDEAALRRP IGGKQVMREQ
LEHLIEVSKA PHIQIQIIKF EAGGHAAAGG PFTMLRFPDQ ELPDIIYIEQ LTSALYLDKR
DDVDLYTASM ERLCVQAEEP KKTPEILREI IGQLYS