| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5721 |
|---|
| Symbol | |
|---|
| ID | 8886936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6087065 |
|---|
| End bp | 6088591 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase family 39 |
|---|
| Protein accession | YP_003514444 |
|---|
| Protein GI | 291303166 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.203068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCCG CCGCCGTTGA CGCCCCCGTG CGCCCCCCGG CCGACCCCAC CGACCCGGTC
CCGGCACGCC TGCGCGCCCG CCTGTCCCCC TGGCGCCCCA CCAACCGGCT TCAGGGCTGG
CTCATCGCGG GCCTCGTCAC GGCTTTCGGC GCCGCCCTGC GCCTCGTCGG CCTCACCCAC
CCCAAGGGCC TCATCTTCGA CGAGGTCTAC TACGCCCAGG ACGCCAAACA ACTCCTCGAC
CACGGCGTCG AATGGGACGT CGAGACCGCC AACGGCTCCT ACGTAGCCCA CCCCCCACTG
GGCAAGTGGT GCATCGCCCT CGGCGAATGG CTGTTCGGCT ACGACGAGTT CGGCTGGCGC
ATCTCCTCAG CGGTGGCCGG GATCATCTCG ATCCTCCTCA TCACCCTGCT GGCCCGCCGC
CTCACCGGCT CCACAGTGCT GGGAGCCGTC GCCGGTCTGC TGGTCTCCAT GGACGGCATG
CACCTGGTCC TGTCGCGCAC CGCACTGCTC GACATCTTCC TGATGCTCTT CCTCCTGGCC
GCCTTCTACT GCCTCGTCCT CGACCGGGAA TCCCGCCGCT CCCGCTGGCT GGCGGCCCTG
TCGTCCGGCC TGGACCCCAC CAAGAAGAGC CCACCGTTCC AGTTCCCCTG GTGGCGCGTC
GCCGCGGCCG TCCTGTCCGG CTGCGCCATG GGCGTCAAGT GGAGCGCCCT GTGGTTCATC
ATCCTGTTCC TCATCCTCAT CTTCGTCTGG GAATGGCAAC TGCGCCGCCT GGTCGGCACC
CGCACCCCCA TCCTCGACGC CCTGGTCACC GAGATCGGCT GGCTGTTCAC CTTCGGCATC
GTCTCCATCC TCACCTACCT GGCCACCTGG ACCGGCTGGT TCGCCACCGA CAACGGCTAC
TTCCGGCACT GGCTGGCCGA CTCCGGCTCC TCAGAACCCC CCGTCCTCGG CGCCCTGGTC
AACCTGTGGC ACTACCACAC CGACGTCCTC AGCTTCCACG ATGGACTGTC GAGCCCCCAC
ACCTACCAGT CCTGGCCCTG GCAGTGGATC CTCGACATCC GCCCCGTCGT CTTCTTCTGG
TCCTCCGACG TCGACTGCGG CGCCCCCGAA TGCGCCTCCG AAGTGCTCCT CCTGGGCACC
CCACTCCTGT GGTGGGCCTT CATCCCCGCC CTGATAGCCC TCGTGTGGTG GGGTCTGTCC
AACCGAGACT GGCGCGCCTG GGCGATCTTC GGCGCCGCCT TCGCGGGCAT AGCGCCCTGG
CTCCTCTACC CCGACCGCAC CATGTTCTCC TTCTACGCCC TCCCCGCGGT CCCCTTCCTC
GTCCTCGCCC TCACGGTCAC CCTCGGCCTC ATCATCGGCC CCCGCACGGC CACCCCCGAA
CGCCGCCTCT CCGGCTCCCT CATAGCAGCG GGCATAGTCA TCCTCATCGC CCTGTGCTTC
GCCTACTTCT GGCCACTGTA TACAGGCCAG ATCATGACCA ACGACGACTG GCACGCCCGC
ATCTGGCTCG AAGACCGCTG GATCTGA
|
|---|
| Protein sequence | MSAAAVDAPV RPPADPTDPV PARLRARLSP WRPTNRLQGW LIAGLVTAFG AALRLVGLTH
PKGLIFDEVY YAQDAKQLLD HGVEWDVETA NGSYVAHPPL GKWCIALGEW LFGYDEFGWR
ISSAVAGIIS ILLITLLARR LTGSTVLGAV AGLLVSMDGM HLVLSRTALL DIFLMLFLLA
AFYCLVLDRE SRRSRWLAAL SSGLDPTKKS PPFQFPWWRV AAAVLSGCAM GVKWSALWFI
ILFLILIFVW EWQLRRLVGT RTPILDALVT EIGWLFTFGI VSILTYLATW TGWFATDNGY
FRHWLADSGS SEPPVLGALV NLWHYHTDVL SFHDGLSSPH TYQSWPWQWI LDIRPVVFFW
SSDVDCGAPE CASEVLLLGT PLLWWAFIPA LIALVWWGLS NRDWRAWAIF GAAFAGIAPW
LLYPDRTMFS FYALPAVPFL VLALTVTLGL IIGPRTATPE RRLSGSLIAA GIVILIALCF
AYFWPLYTGQ IMTNDDWHAR IWLEDRWI
|
|---|
| |