| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5718 |
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| Symbol | |
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| ID | 8886933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 6084103 |
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| End bp | 6084741 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003514441 |
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| Protein GI | 291303163 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.283499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTCCA GTCAGCAGAA GTCCAGCTAC CACCACGGGA ACCTCCGTCA GGAACTGCTG
GACGCGTCGC TGCGGCTGAT CGCCGAGGAG GGCGTCGGCG CGGTGAGTCT GCGACGGGTG
GCGCGCGAGG CGGGCGTCAG CCCCGGCGCG CCGTACCACC ACTTCGCCGA CCGCGCGGCG
CTGCTGGCGG CGCTGTCGAC GACCGGGTTC AACAAACTGG CCGAGCGGCT GTGCGCCGCG
CGCGAGGGCT CGGACGAACC CCAGGACGCG CTGCTGGCCA TGCTGGACGC CTATGTGGAG
TTCGCCGCGG GCAACCGTGC CCACTTCCAG CTGATGTTCC GTCCCGAACT GTCGTTGCCC
GACAAGCATC CCGACGTCCA CGCCGCCGGG GACGCGGCCT TCAAGGAGCT CACCGAGCCG
CTGGAAGCCT GGCAGCGCGA GGGACTGCTG CCCGCCGCCG ACCTGACCGG ACTGGTCATG
ACACTGTGGG CACTCGGGCA CGGGATCGCA TCACTATGGA TCGACGGGCA TCTCGAGAAA
CGTTGCACCG AAATGAACTC CACCCCTGAC GAACTGTTGC GGCAGGTCAG GGCGACGGTC
GCGGACCTGA TCGGCCGTTG GTCGCCGCCA TCAGGCTGA
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| Protein sequence | MSSSQQKSSY HHGNLRQELL DASLRLIAEE GVGAVSLRRV AREAGVSPGA PYHHFADRAA
LLAALSTTGF NKLAERLCAA REGSDEPQDA LLAMLDAYVE FAAGNRAHFQ LMFRPELSLP
DKHPDVHAAG DAAFKELTEP LEAWQREGLL PAADLTGLVM TLWALGHGIA SLWIDGHLEK
RCTEMNSTPD ELLRQVRATV ADLIGRWSPP SG
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