Gene Snas_5701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5701 
Symbol 
ID8886916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6063251 
End bp6064210 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content71% 
IMG OID 
ProductBile acid:sodium symporter 
Protein accessionYP_003514424 
Protein GI291303146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGCCC TGCAGCGCAT CGGCGCCTTC ACCGGCCGGT GGTTCCCGGT CATCGTCCTG 
GCCGCCGGAG CCGTGGCCCT CGCCGCGCCG TCGGCCTTCG CCTTCGCCGC CCCGGCGGTG
CCGTGGCTGC TGGCGGTGAT CATGCTCGGC ATGGGCATGA CCCTGCGTCC GGCCGACTTC
GCGATCATCG GCAAACGTCC CATCCCGGTG CTGTTGGGCG TCGCCGCCCA GTACGTGGTG
ATGCCGCTGC TCGGCTACGG GCTCGCGGTC GCGTTCGACC TGCCCACGAT GCTGGCCGTC
GGCATGGTGC TGGTGGGCGC GGCGCCCGGC GGCACCGCCT CCAACGTGAT GGTGTTCCTG
GCGCGCGGCG ACACCGCGCT GTCGGTCGCG ATGACCACCC TGTCCACACT GCTGGCTCCG
CTGCTCACCC CGGTTCTGGT GTGGCTGTTG GCGGGCCGGT TCCTGCCCGT CGACGTGGGC
GACCTGTTCT TCTCGATCGT CCAGGTGGTG CTGGTCCCGA TCGTGATCGG CCTGCTGTTG
CGCCGCTTCG TCCCGAAGGT CGTCGACCGC TGCGAGGACG CGCTGCCGCT GGTGTCGGTC
GCGGGCATCA CCGTCGTGGT CATGGTCGTG GTGGCGGGCA GCGCCGACAT TCTGCTGAAG
GTCGGGGCGC TCGTCGTGCT GGCCGTGATC GTCCACAATG TGTGCGGCCT GGCGTTGGGT
TACGGCATCG CGCGGGTCTT CGGCATGCCC GTCACGGGAC GGCGCGCCAT CAGCATCGAG
GTCGGCATGC AGAACTCGGC GCTTGCCGCG GCACTGGCGA TGGCGCACTT CAACCCGGCC
GCGGCGCTCC CGGCCGTCGT GTTCTCGGTG TGGCACAACG TCTCCGGCTC GCTGCTGGCG
GGCTACTGGT CCCGCCGGAC CAGCCCGGAC ACCGAGCCAG CACCTGAACC GGCTCCATAG
 
Protein sequence
MSALQRIGAF TGRWFPVIVL AAGAVALAAP SAFAFAAPAV PWLLAVIMLG MGMTLRPADF 
AIIGKRPIPV LLGVAAQYVV MPLLGYGLAV AFDLPTMLAV GMVLVGAAPG GTASNVMVFL
ARGDTALSVA MTTLSTLLAP LLTPVLVWLL AGRFLPVDVG DLFFSIVQVV LVPIVIGLLL
RRFVPKVVDR CEDALPLVSV AGITVVVMVV VAGSADILLK VGALVVLAVI VHNVCGLALG
YGIARVFGMP VTGRRAISIE VGMQNSALAA ALAMAHFNPA AALPAVVFSV WHNVSGSLLA
GYWSRRTSPD TEPAPEPAP