Gene Snas_5690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5690 
Symbol 
ID8886905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6053074 
End bp6053970 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514413 
Protein GI291303135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.300338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATAC AACGTTCGCG CCTGGCGCGG AGGCTGACGG CGGTCTCGGC GCTGGCGCTG 
GTCGCGGCCG TCGCCGTGGC CACCACGGCG GCCCAGGCCT CCGCGGATCC CGTCGGCACC
GGCACGTCGA CGGCAACCGA GGAAAAGGCC GAGAAGAAGG TCAAGGAGGT CAACTTCGCC
GGGACGGTGG CGCTCGACAA CTGTTCCGGT TCGCTGGTGA CCATGCCGAA CTCGGCGCCC
GAGGACAAGG CCATGGTGCT GTCCAACGGC CACTGCCTGG AGTCGGGCAT GCCCGGCCCG
GGCGAGGTGA TCGTGGACGA GCCGTCCCAG CGCAGCTTCG AACTGCTGGA CGCCTCGGCC
AACGCCGTCG GCACGCTGAC GGCCTCCAAG ATCGCCTACG CGACCATGAC CGACACCGAC
GTCTCGCTGT ACGAGCTCAC CGAGTCCTAC GCCGAGATCA AGGACAAGTA CTCGATCGAC
GCGCTGAAGG TCTCGGCCGA GCACCCGAAG GAGAAGACCG CCATCACCGT GGTCTCCGGC
TACTGGCAGG AGACCTACGC GTGTGACATC GACGGCTTCG TCTTCGAACT GCGCGAGGCC
GACTGGGTCA TGAAGGACTC GATCCGCTAC ACCGAGGCCT GCAAGACCAA GGGCGGCACC
TCGGGTTCGC CGGTGGTCGA CAACGCGACC AACGAGGTCG TCGGCGTCAA CAACACCGGC
AACGAGAACG GTGAGGAGTG CACCATGAAC AACCCGTGTG AGGTCGACGA GAACGGTCAG
GTGACGGTCC GCGAGGGCAT CAACTACGGC CAGCAGACCT ACATCATCAC GACCTGTGTG
GACAAGGGCA ACGTGGTCAA TCTCGAGTTG GACGGCTGCA CGCTGCCCAA GCCCTAA
 
Protein sequence
MRIQRSRLAR RLTAVSALAL VAAVAVATTA AQASADPVGT GTSTATEEKA EKKVKEVNFA 
GTVALDNCSG SLVTMPNSAP EDKAMVLSNG HCLESGMPGP GEVIVDEPSQ RSFELLDASA
NAVGTLTASK IAYATMTDTD VSLYELTESY AEIKDKYSID ALKVSAEHPK EKTAITVVSG
YWQETYACDI DGFVFELREA DWVMKDSIRY TEACKTKGGT SGSPVVDNAT NEVVGVNNTG
NENGEECTMN NPCEVDENGQ VTVREGINYG QQTYIITTCV DKGNVVNLEL DGCTLPKP