Gene Snas_5687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5687 
Symbol 
ID8886902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6050449 
End bp6051636 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID 
Productlow temperature requirement A 
Protein accessionYP_003514410 
Protein GI291303132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.107888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCT TGGGACACTC AGGACAACTG TGGCGGCGGG TGATGCGTCC CCGCGATCCC 
GACGAGCCGC ATCGCGCCGC GACCGTCCTG GAACTGTTCT TCGACCTGGT CTTCGTCGTC
GCGGTGGCGC AGGCGGCGGT CGGACTGGAG CACGCCTTCG TCGAGCACCA CATCGGATCC
GGCGTCGTCT ACTACGCCAT GGCGTTCTTC GCGATCTGGT GGGCGTGGAT GAACTTCACC
TGGTTCGCCT CGGCCTACGA CGTCGACGAC GTGCCCTACC GGCTTTTGAC GCTGTTGCAG
ATGTCGGGCG CGCTGGTGAT GGCCGCCGGG GTCGGCGACA CGATCTCCGT CCACAACTAC
ACCGTCATGG TCGCGGGCTA CGTCCTGATG CGGGTGGCGA TGATCGGGCA GTGGCTGCGC
GCTGCGGCCT GCGATCCCGC GCGTCGGGTC ACGGCGCTGC GGTACGCGGG CGGCATCGCG
GTGGTGCAGT GCTTCTGGGT CGGGTGGCTG TGGGTCCCGG CGAAGTTCCA GATCCCGGCC
TTCGTGGTGT TCGCGTTGCT GGAACTGGCG GTGCCGCCGT TCGCCGAACG GGTCAACGTC
ACCCCGTGGC ATCCGCACCA CATCGCCGAA CGGTACGGAC TGTTCACCAT CATCGTGCTG
GGCGAGTGCA TCCTGGCGGC CACCACCTCG GTGCAGTCGG CGCGGGCGGC CGGGGCCGGT
GGCGTCGAGC TGTACCTGCT GGCGGGTGCC GGACTGGTCA TCGTGTTCGC GATGTGGTGG
GTCTACTTCG ATCAGCCGGG GCACGTCATG TTGCTGACGA GCCTGGCCAA GGCCCTGAAA
TGGGGCTACG GCCACCTGCT GATCTTCGCC TCGGTCGCCG CCGTGGGCGC CGGGTTGCAG
GTGGCCGTGG CCGTCCATCG TGGAGATGCG GAACTGGGGG CGACGACGGT CGGGTACGCC
GTCGCCGTTC CGGTCGCTGT GTATCTGCTC GGAGTGGGGG TGCTCCAGAT ATTCCCGCGC
GCCTGTTGGC AGATGACCGT GGCGGTGCTG GTCGCCGTCA TCGCCGTGCT GGTGGCGCCG
TCGCTGCTGA AGTCGTCCAT CGTGGTCATC GCGGCCTGCC TGGTGGTGCT GGTCGCCGTG
ATCGCCGTCC TCGACCATCG CCTGGCCCGG GAGGCGAACC CGGGTTGA
 
Protein sequence
MTALGHSGQL WRRVMRPRDP DEPHRAATVL ELFFDLVFVV AVAQAAVGLE HAFVEHHIGS 
GVVYYAMAFF AIWWAWMNFT WFASAYDVDD VPYRLLTLLQ MSGALVMAAG VGDTISVHNY
TVMVAGYVLM RVAMIGQWLR AAACDPARRV TALRYAGGIA VVQCFWVGWL WVPAKFQIPA
FVVFALLELA VPPFAERVNV TPWHPHHIAE RYGLFTIIVL GECILAATTS VQSARAAGAG
GVELYLLAGA GLVIVFAMWW VYFDQPGHVM LLTSLAKALK WGYGHLLIFA SVAAVGAGLQ
VAVAVHRGDA ELGATTVGYA VAVPVAVYLL GVGVLQIFPR ACWQMTVAVL VAVIAVLVAP
SLLKSSIVVI AACLVVLVAV IAVLDHRLAR EANPG