Gene Snas_5670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5670 
Symbol 
ID8886885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6027820 
End bp6028581 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003514393 
Protein GI291303115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0408186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAG ACGCGATCAT TGAGGCCCAC GACCTGGGAG TCCGCTTCGC CAAGGGACGC 
AGGCGCAATG CCCGGCTCCG CGAAGTGTTC ACCCGGCGCA ACCGAAGCAC GACCGCCGCT
CCGGCCCCCG AGTTCTGGCC GCTGCGGCAC CTGAGCTTCG AGATCCAACC CGGGGAGGCC
GTCGGGGTCA TCGGCTCCAA CGGCACCGGG AAGTCGACGC TGTTGCGGCT GTTGGCCGGA
GTGCTGATCC CCGACGAGGG ACAGGTCATC CGGCGCGGCC GGGTGGCGCC GCTGATCGCG
CTGTCGGCGG GGTTCTCCGG CGACCTGACC GGCCGGGAGA ACGTCCAGCT GGTGGCGTCG
CTGCACGGCA TGGACCGCAA GACCCTCAAG TCCAAGTTCG ACGAGATCGT CGCCTTCGCC
GAGGTCGAGG ACCACATCGA CACCCCGGTG CGGCACTACT CGTCCGGCAT GAAGGTGCGG
CTGGGCTTCT CGGTGATCTC GCAGCTGGAG CACCCGATCC TGCTGGTCGA CGAGGCCCTT
GCCGTGGGCG ACAAGCGCTT CAAGAAGAAG TGCTACAAGA CGATGCGCAA CCTCCTCAAC
GAGGGCCGCA CCCTGATCCT GGTGTCGCAC AGCGAAAGAG ACCTCACCAA GTTCTGCACC
CGGGGCATGT TCCTCAACGC CGGGGAACTC GAGGTCGACG GCACCGTCGA CGACGCCCTG
GCCGCCTACC AGCTCTCCGA GGACCAGAAG GTGCCCGCCT GA
 
Protein sequence
MTEDAIIEAH DLGVRFAKGR RRNARLREVF TRRNRSTTAA PAPEFWPLRH LSFEIQPGEA 
VGVIGSNGTG KSTLLRLLAG VLIPDEGQVI RRGRVAPLIA LSAGFSGDLT GRENVQLVAS
LHGMDRKTLK SKFDEIVAFA EVEDHIDTPV RHYSSGMKVR LGFSVISQLE HPILLVDEAL
AVGDKRFKKK CYKTMRNLLN EGRTLILVSH SERDLTKFCT RGMFLNAGEL EVDGTVDDAL
AAYQLSEDQK VPA