Gene Snas_5659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5659 
Symbol 
ID8886874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6016162 
End bp6016875 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514382 
Protein GI291303104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.74039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.268584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACT CTCTGGTAGC CCCCGTCGAG GAGTCGACCA CCGCGACGTC CGGGCTGTGG 
CTGGTGGAGG ACACCCAGAC CCTCATCGAC GCGATCGAGT CCGGCTCCTG GGTGGACGGC
ACCATCGGCG GCATCACCGT CGGTCTCGAC GCGCTGTCGG TGGCGATGGA CCCGTTGGGC
GCCTTGGCAT CCATGGCGAT CGGCTGGCTC ATCGAACACG TCAAACCGCT GCGGGACGCG
CTGGAGGAGG TCACCGGCGA CGCCGACAAG GTGAACTCCT ACGCCAAGAC CTGGGAGAAC
GTCTCCACCA AACTCCTGGA CGCCGGTACC AAGCTGCAGA CGGCGGCCCA CAAGGACCTG
GAGACCTGGC AGAGCCCGGC GGCCAACGCG TACTCGATCC ACGCCGACTA CACCACCAAC
GCGGTGGGCG GCATCGGCGC GCTCGCCGAG GTCATGTCCG CGGCCACCGC GGGCGCCGGG
ATGCTCGTGG CCACCACCCG CGCCATCGTG CGCGACCTGA TCGCCGACTG CGTCGCCACC
CTGCTGGTCC GCATCCCCGA ATGGCTCGCC GAGGTCGGTC TGACCCTGGG CCTGGGGACA
CCCTGGGTGA TCTCGCAGGC CGCCTCCCTC ATCGCCAAGT GGGTCGGTCG GATCACCAAC
TACCTCAACT CCCTGGTGTC CAGCATCTCC AACCTGCAAG CGCTGCTGGC CTGA
 
Protein sequence
MNDSLVAPVE ESTTATSGLW LVEDTQTLID AIESGSWVDG TIGGITVGLD ALSVAMDPLG 
ALASMAIGWL IEHVKPLRDA LEEVTGDADK VNSYAKTWEN VSTKLLDAGT KLQTAAHKDL
ETWQSPAANA YSIHADYTTN AVGGIGALAE VMSAATAGAG MLVATTRAIV RDLIADCVAT
LLVRIPEWLA EVGLTLGLGT PWVISQAASL IAKWVGRITN YLNSLVSSIS NLQALLA