Gene Snas_5655 details

Gene Information

• Locus tag: Snas_5655
• ID: 8886870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Stackebrandtia nassauensis DSM 44728
• Kingdom: Bacteria
• Replicon accession: NC_013947
• Strand: +
• Start bp: 6012181
• End bp: 6012900
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 65%
• Product: flavoprotein
• Protein accession: YP_003514378
• Protein GI: 291303100

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.640498
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.28006
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCTCGC ACCCCACCCC AGCACTACGG ACAGGAACCG AGACTCCCGT GCCCGGTATC 
ACAACCCTCC CTTGCGGACG GGTGCTCGTC GGTATCTCCG GCTCCGTCCT CGCCGCCGAG 
ATCACGAGCT ACCTGCGGGC GCTCCGCAGC AGACTGGCCA GCGAGATCGT CGTCTTCGTG 
ACCACGTCAG CGCGGCAGTT CGTGACACTC GACATGCTGA AGCTCTACGC CGACGACATC 
GTCCTGGCCG ACCGCCCCGG TCGCTTCCGG GTACCTCACA TCGACGGCCC GGATTGGGCG 
GACGTCTTCG CGATCGTCCC CGCCTCGGCG AACACACTCG GCAAGGCCGC CAACGGAATA 
GCCGACGATC TCCTGTCAAC GGCGATGGTC GCCGCGGACA AGCCGATCTT CTTCGCCCCG 
GCCATGAACG TGAGGATGTG GCGATCGGCC CCGGTGCGTC GAAACGTACA GCGGCTCAGG 
GAGGACGGGC ATTACATCGT CGAACCCGAT GTCGGGTTGG CGTTGTCGAG TGGGCTCGCC 
GAAGGGGTCG CCCCAACGGC CGAGAAGGTG TTGTCTCATT TGTGGCACTT CAGAATGCGG 
CAACTCCGGG ACGACTACTG GGATGAGGCG ATCAGTGTCG CGCCCCGTCC GCCTGCCGCG 
TTGACGGCGG CCACAAGGAC CAGTCTGCCG TTGACCGTGG CGAGTGGTTC CGGGAAGTAG 

 

Protein sequence

MSSHPTPALR TGTETPVPGI TTLPCGRVLV GISGSVLAAE ITSYLRALRS RLASEIVVFV 
TTSARQFVTL DMLKLYADDI VLADRPGRFR VPHIDGPDWA DVFAIVPASA NTLGKAANGI 
ADDLLSTAMV AADKPIFFAP AMNVRMWRSA PVRRNVQRLR EDGHYIVEPD VGLALSSGLA 
EGVAPTAEKV LSHLWHFRMR QLRDDYWDEA ISVAPRPPAA LTAATRTSLP LTVASGSGK