Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5653 |
Symbol | |
ID | 8886868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6009795 |
End bp | 6010463 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003514376 |
Protein GI | 291303098 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.297602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.281198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAT TCCTGATCGG CGCCGCCGGC GGCATCGGCC GCAGGCTCTC GCCACTCCTC GCCCACCGCG GCGACGAGAT CACCGGCATC CACCGCGACA GCGCCCAGAC CGAGACCGTC GAATCCAGCG GCGCCACCTC CCTCCTGGGC GACCTCATCG CCGACTCGAC CGACGAACTC GCCACCAAGA TGCGCGGCCA CGACGCCGTC GTCTTCTCCG CCGGAGCCCA CGGCACCGGC CAGGAACTCA CCACCCTCAT CGACGGCATC GGCCTCGAAA AAGCCGCCGA AGCGGCAGCC CAAGCCTCAG TACCCCGCTT CGTCCTGGTC TCGGTCTTCC CCGACGCGGG CCGCGACCGT GAACGCCGCG AAGGCTTCGA GCACTACATG AAGGTCAAGA AGACCGCCGA CGTCTACCTC ACCCGCACCG ACCTCGACTG GCTCATCGTC CGCCCCGGCA CCCTACGAGA CGAACCCGGC ACCGGCAAGG TCACAGCGGG CCCGGCCATC GAATACGGCG ACGTCCCCCG CGACGACGTC GCGGCCTTCA TCGACGCGGC CCTCCACGAA CCCGCCCTCA CCCGCACCAT CGTCGAACTC ACCGGCGGCG AAGTCCCCAT CTCCGGCGCC ATCCGAGCCC TGCTCAACGG CCGCCCCCGC GAATCCTGA
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Protein sequence | MKIFLIGAAG GIGRRLSPLL AHRGDEITGI HRDSAQTETV ESSGATSLLG DLIADSTDEL ATKMRGHDAV VFSAGAHGTG QELTTLIDGI GLEKAAEAAA QASVPRFVLV SVFPDAGRDR ERREGFEHYM KVKKTADVYL TRTDLDWLIV RPGTLRDEPG TGKVTAGPAI EYGDVPRDDV AAFIDAALHE PALTRTIVEL TGGEVPISGA IRALLNGRPR ES
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