Gene Snas_5648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5648 
Symbol 
ID8886863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6004781 
End bp6005590 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514371 
Protein GI291303093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.343827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.189462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG TCGAGTACCG CAAGCCCAGA AGTCGCGGCG CCGTGAGGCT CATCGTGTTC 
CTCGCCGTCG TGGTGGTGCT GACGGCCGGA GGGGTGTTCG CGTGGAAGTT CCTGTTCAAC
GGCCCGAAGC ACAAGGATGA GCAGACCAAG ACCTACGACG AGACGATCAC GCGTTTGGAC
GTCGAGGGGA ACTCCGGAAA CGTTGACATC GTGGCGGGTG AGGGTGACGA GATCGAGGTT
GAGACCACAC TGGAATGGCG TGGCAAGGAG AAGCCGGGTG CCGACCAGGA CGTGACCGGC
AAGACCCTCA AGGTCACCGC GACCGGTTGC GAGGGCATCG ACCTGTTCGG CGGCCTCACC
TGCGAGGTCC ACTTCCGCAT CGCGGTGCCC GCCGACATCG ACCTCAAGGC CGAGGTCGAC
TCCGGCAACC TCACCGTCGC CGGGATCAAG GGCGAACAGA ACCTGGCCTG CGACTCCGGT
GACATCGAGG TGGAGGGCTC GGGCGAGAAG CTGACGGTGC ACGCCGACTC CGGCAACGTC
GTCGGCCGGG AACTGGACGC CACCACCGTG AAGGCCGACG TGGACTCCGG CGACGTCGAA
CTCGAGTTCA CCACCGCGCC CAAGAAGACC CGGGCCTCGG CCGACTCCGG CGACGTGACC
CTGTCGGTGC CGAAGGTCAA GGAGGGCTAC GACGTCAACA TCGGCGTGGA CTCCGGCGAC
AAGAGCGTCG AGGTCAAGAC GGCCTCCGAC TCGCCCCGCA AGATCGACGG CACCGTCGAC
TCCGGCGACT TCACCGTCGC CTACGCCTAG
 
Protein sequence
MSEVEYRKPR SRGAVRLIVF LAVVVVLTAG GVFAWKFLFN GPKHKDEQTK TYDETITRLD 
VEGNSGNVDI VAGEGDEIEV ETTLEWRGKE KPGADQDVTG KTLKVTATGC EGIDLFGGLT
CEVHFRIAVP ADIDLKAEVD SGNLTVAGIK GEQNLACDSG DIEVEGSGEK LTVHADSGNV
VGRELDATTV KADVDSGDVE LEFTTAPKKT RASADSGDVT LSVPKVKEGY DVNIGVDSGD
KSVEVKTASD SPRKIDGTVD SGDFTVAYA