Gene Snas_5646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5646 
Symbol 
ID8886861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6002127 
End bp6003245 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514369 
Protein GI291303091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.145203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGG AACTGACGAC GCGGGCCGTG TTCGCGAAAC GAGCCGAGCA GTGGAACGAC 
AAGGCGCCGG TGTTCGCGGC GATGTGCCGG GCGGTCGCCG GCGAGCCTGA GCTCGCGGCC
TGTGTGGACG ACGGCCCCGT CGCGGGGCGG CCGAAGCACA GCCCGGCGTG GTCGCGCCCG
CAGCAGCTGG CGGGGCTGGT GTCGCGGTTG TTGCGCACCA AGGCATCCGG GCACGAGTTG
ACGGAGTACT GGGGCACCTT GGGCGGGCGC TTGGCCGCCG ACGGCTCGCT GGCCGACGCG
TTTCGCGATC TGGCCCGCCG CTACCAAACC GAGCTGGCCG AGCTGGCGGG CGTCCACAGC
TCGGCACGGG GCAACGACCC GCTCGTCGCC GTCGTGCTGT GGCCCGGCAT CGCCTGGGCC
GCGAGCCAAG CCTCGGGTCC GGTCGCCTTG CTGGAACTGG GTTCGGCCGC GGGCACCTGC
CTGTACCCCG ACCGGTACGG CTACCGCTTC GGCGATCGAC TCCTCGGCGG TGACCGTCCG
CTCGTCCTCC CGATCGACTG GAACGGCGAG AAACCCGGGT TCCTTTCGGC CAGCGTGGAT
GTCGCCGCGC GGATCGGTCT GGAGTACGAA CCGGTGCGAC GCGAGGACGA CGACGCCGTC
GCCTGGCTGC GCGACTGCGT CCTGCCCGAC AACACCGACG AACTCGCCCG CGTCGACGGC
GCGCTGTCCG TCATGGAACC CGGCGGCGTC GACTGGCGCG TCGGGGACTA CATGGAGACG
CTGCCGAAGG CACTGTCCGA AGTGCCCGAC GGTGTCACGC CGATCGTCTT CGGCGCCCAC
ACCCTGTGCT GCGCGCAAGA ACGCGAACGG CTGCCCCGGA TCCTCGCCGA GTCCGGCCGG
GACCTGGTGT GGGTGGCCAA GGAGTGCTCC GATCACGGGC TCGCACTGGT CAGCGACACC
GCGTCCGAGT ACGAGGTGCC CGAGGGAACC CCGAAGCGGG TGCTGTTGAC GGCCGTGCGC
TACCGCGCTG GCCGGGCGCT CGACGGCTGG GTGCTGGGCG AGCCCGATCA GTGGAACACC
TCGCTGGCTT GGGCGCCGCG GCCCTTCCCG CCGCGGTGA
 
Protein sequence
MTEELTTRAV FAKRAEQWND KAPVFAAMCR AVAGEPELAA CVDDGPVAGR PKHSPAWSRP 
QQLAGLVSRL LRTKASGHEL TEYWGTLGGR LAADGSLADA FRDLARRYQT ELAELAGVHS
SARGNDPLVA VVLWPGIAWA ASQASGPVAL LELGSAAGTC LYPDRYGYRF GDRLLGGDRP
LVLPIDWNGE KPGFLSASVD VAARIGLEYE PVRREDDDAV AWLRDCVLPD NTDELARVDG
ALSVMEPGGV DWRVGDYMET LPKALSEVPD GVTPIVFGAH TLCCAQERER LPRILAESGR
DLVWVAKECS DHGLALVSDT ASEYEVPEGT PKRVLLTAVR YRAGRALDGW VLGEPDQWNT
SLAWAPRPFP PR